English
Related papers

Related papers: Persistent Homology in $\ell_{\infty}$ Metric

200 papers

We present a parallelizable algorithm for computing the persistent homology of a filtered chain complex. Our approach differs from the commonly used reduction algorithm by first computing persistence pairs within local chunks, then…

Algebraic Topology · Mathematics 2013-03-05 Ulrich Bauer , Michael Kerber , Jan Reininghaus

In the Max-k-diameter problem, we are given a set of points in a metric space, and the goal is to partition the input points into k parts such that the maximum pairwise distance between points in the same part of the partition is minimized.…

Computational Geometry · Computer Science 2024-04-08 Henry Fleischmann , Kyrylo Karlov , Karthik C. S. , Ashwin Padaki , Stepan Zharkov

Persistent homology is a method from computational algebraic topology that can be used to study the "shape" of data. We illustrate two filtrations --- the weight rank clique filtration and the Vietoris--Rips (VR) filtration --- that are…

Computational Geometry · Computer Science 2016-10-30 Bernadette J. Stolz , Heather A. Harrington , Mason A. Porter

Consider a Poisson point process within a convex set in a Euclidean space. The Vietoris-Rips complex is the clique complex over the graph connecting all pairs of points with distance at most $\delta$. Summing powers of the volume of all…

Probability · Mathematics 2019-12-03 G. Akinwande , M. Reitzner

Persistent homology is a relatively new tool often used for \emph{qualitative} analysis of intrinsic topological features in images and data originated from scientific and engineering applications. In this paper, we report novel…

Biomolecules · Quantitative Biology 2014-12-09 Kelin Xia , Xin Feng , Yiying Tong , Guo Wei We

Let $G$ be a group acting properly and by isometries on a metric space $X$; it follows that the quotient or orbit space $X/G$ is also a metric space. We study the Vietoris-Rips and \v{C}ech complexes of $X/G$. Whereas (co)homology theories…

Metric Geometry · Mathematics 2020-07-14 Henry Adams , Mark Heim , Chris Peterson

Large datasets represented by multidimensional data point clouds often possess non-trivial distributions with branching trajectories and excluded regions, with the recent single-cell transcriptomic studies of developing embryo being notable…

The structure of many complex networks includes edge directionality and weights on top of their topology. Network analysis that can seamlessly consider combination of these properties are desirable. In this paper, we study two important…

Social and Information Networks · Computer Science 2021-11-24 Frederique Oggier , Silivanxay Phetsouvanh , Anwitaman Datta

In this paper we study the homology of a random Cech complex generated by a homogeneous Poisson process in a compact Riemannian manifold M. In particular, we focus on the phase transition for "homological connectivity" where the homology of…

Probability · Mathematics 2017-04-25 Omer Bobrowski , Goncalo Oliveira

A central problem in topological data analysis is that of computing the homology of a given simplicial complex. Said complexes can have arbitrary large number of simplices, as can happen, for example, if the space is the Rips-Vietoris or…

Combinatorics · Mathematics 2021-11-11 Francisco Martinez-Figueroa

Given a set $\Omega$ and a proximity function $\phi: \Omega \times \Omega \to \mathbb R^+$, we define a new metric for $\Omega$ by considering a path distance in $\Omega$, that is considered as a complete graph. We analyze the properties of…

Social and Information Networks · Computer Science 2019-05-21 J. M. Calabuig , H. Falciani , A. Ferrer-Sapena , L. M. García-Raffi , E. A. Sánchez-Pérez

Graph neural networks have become the default choice by practitioners for graph learning tasks such as graph classification and node classification. Nevertheless, popular graph neural network models still struggle to capture higher-order…

Machine Learning · Computer Science 2024-11-27 Davide Buffelli , Farzin Soleymani , Bastian Rieck

We consider the problem of efficiently computing a discrete Morse complex on simplicial complexes of arbitrary dimension and very large size. Based on a common graph-based formalism, we analyze existing data structures for simplicial…

Computational Geometry · Computer Science 2018-11-13 Ulderico Fugacci , Federico Iuricich , Leila De Floriani

We revisit Gersten's $\ell^\infty$-cohomology of groups and spaces, removing the finiteness assumptions required by the original definition while retaining its geometric nature. Mirroring the corresponding results in bounded cohomology, we…

Geometric Topology · Mathematics 2025-10-03 Francesco Milizia

Machine learning for point clouds has been attracting much attention, with many applications in various fields, such as shape recognition and material science. For enhancing the accuracy of such machine learning methods, it is often…

Machine Learning · Computer Science 2023-12-29 Naoki Nishikawa , Yuichi Ike , Kenji Yamanishi

In this paper, we analyze the celebrated EM algorithm from the point of view of proximal point algorithms. More precisely, we study a new type of generalization of the EM procedure introduced in \cite{Chretien&Hero:98} and called…

Computation · Statistics 2012-01-31 Stéphane Chrétien , Alfred O. Hero

We investigate harmonic maps from weighted graphs into metric spaces that locally admit unique centers of gravity, like Alexandrov spaces with upper curvature bounds. We prove an existence result by constructing an iterative geometric…

Metric Geometry · Mathematics 2007-08-22 J. Jost , L. Todjihounde

Given a set P of n points and a constant k, we are interested in computing the persistent homology of the Cech filtration of P for the k-distance, and investigate the effectiveness of dimensionality reduction for this problem, answering an…

Computational Geometry · Computer Science 2021-10-13 Shreya Arya , Jean-Daniel Boissonnat , Kunal Dutta , Martin Lotz

Hypergraph is a topological model for networks. In order to study the topology of hypergraphs, the homology of the associated simplicial complexes and the embedded homology have been invented. In this paper, we give some algorithms to…

Algebraic Topology · Mathematics 2018-01-03 Shiquan Ren , Chengyuan Wu , Stephane Bressan , Jie Wu

Recent advances in large-margin classification of data residing in general metric spaces (rather than Hilbert spaces) enable classification under various natural metrics, such as string edit and earthmover distance. A general framework…

Machine Learning · Computer Science 2014-07-14 Lee-Ad Gottlieb , Aryeh Kontorovich , Robert Krauthgamer