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In Pattern Matching with Weighted Edits (PMWED), we are given a pattern $P$ of length $m$, a text $T$ of length $n$, a positive threshold $k$, and oracle access to a weight function that specifies the costs of edits (depending on the…

Data Structures and Algorithms · Computer Science 2025-10-21 Panagiotis Charalampopoulos , Tomasz Kociumaka , Philip Wellnitz

The Word Movers Distance (WMD) measures the semantic dissimilarity between two text documents by computing the cost of optimally moving all words of a source/query document to the most similar words of a target document. Computing WMD…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-04-27 Jesmin Jahan Tithi , Fabrizio Petrini

The approximate period recovery problem asks to compute all $\textit{approximate word-periods}$ of a given word $S$ of length $n$: all primitive words $P$ ($|P|=p$) which have a periodic extension at edit distance smaller than $\tau_p$ from…

Data Structures and Algorithms · Computer Science 2018-07-30 Tomasz Kociumaka , Jakub Radoszewski , Wojciech Rytter , Juliusz Straszyński , Tomasz Waleń , Wiktor Zuba

We study the fundamental problem of approximating the edit distance of two strings. After an extensive line of research led to the development of a constant-factor approximation algorithm in almost-linear time, recent years have witnessed a…

Data Structures and Algorithms · Computer Science 2023-12-05 Karl Bringmann , Alejandro Cassis , Nick Fischer , Tomasz Kociumaka

Time series are high-dimensional and complex data objects, making their efficient search and indexing a longstanding challenge in data mining. Building on a recently introduced similarity measure, namely Multiscale Dubuc Distance (MDD),…

Machine Learning · Computer Science 2025-10-28 Azim Ahmadzadeh , Mahsa Khazaei , Elaina Rohlfing

Positive linear programs (LP), also known as packing and covering linear programs, are an important class of problems that bridges computer science, operations research, and optimization. Despite the consistent efforts on this problem, all…

Data Structures and Algorithms · Computer Science 2016-11-15 Zeyuan Allen-Zhu , Lorenzo Orecchia

Edit distance, also known as Levenshtein distance, is an essential way to compare two strings that proved to be particularly useful in the analysis of genetic sequences and natural language processing. However, edit distance is a discrete…

Machine Learning · Computer Science 2019-04-30 Evgenii Ofitserov , Vasily Tsvetkov , Vadim Nazarov

A Dyck sequence is a sequence of opening and closing parentheses (of various types) that is balanced. The Dyck edit distance of a given sequence of parentheses $S$ is the smallest number of edit operations (insertions, deletions, and…

Data Structures and Algorithms · Computer Science 2022-08-23 Dvir Fried , Shay Golan , Tomasz Kociumaka , Tsvi Kopelowitz , Ely Porat , Tatiana Starikovskaya

Today, very large amounts of data are produced and stored in all branches of society including science. Mining these data meaningfully has become a considerable challenge and is of the broadest possible interest. The size, both in numbers…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-06-11 Andreas Vitalis

Given its status as a classic problem and its importance to both theoreticians and practitioners, edit distance provides an excellent lens through which to understand how the theoretical analysis of algorithms impacts practical…

Data Structures and Algorithms · Computer Science 2023-01-31 Paul Medvedev

A time series consists of a series of values or events obtained over repeated measurements in time. Analysis of time series represents and important tool in many application areas, such as stock market analysis, process and quality control,…

Artificial Intelligence · Computer Science 2013-12-30 Vladimir Kurbalija , Miloš Radovanović , Zoltan Geler , Mirjana Ivanović

Inversion-based image editing in flow matching models has emerged as a powerful paradigm for training-free, text-guided image manipulation. A central challenge in this paradigm is the injection dilemma: injecting source features during…

Computer Vision and Pattern Recognition · Computer Science 2026-03-24 Guandong Li , Zhaobin Chu

Computing the edit distance of two strings is one of the most basic problems in computer science and combinatorial optimization. Tree edit distance is a natural generalization of edit distance in which the task is to compute a measure of…

Data Structures and Algorithms · Computer Science 2022-09-16 Debarati Das , Jacob Gilbert , MohammadTaghi Hajiaghayi , Tomasz Kociumaka , Barna Saha , Hamed Saleh

The edit distance of two strings is the minimum number of insertions, deletions, and substitutions of characters needed to transform one string into the other. The textbook dynamic-programming algorithm computes the edit distance of two…

Data Structures and Algorithms · Computer Science 2023-10-25 Alejandro Cassis , Tomasz Kociumaka , Philip Wellnitz

Mesh offsetting plays an important role in discrete geometric processing. In this paper, we propose a parallel feature-preserving mesh offsetting framework with variable distance. Different from the traditional method based on distance and…

Graphics · Computer Science 2023-10-16 Hongyi Cao , Gang Xu , Renshu Gu , Jinlan Xu , Xiaoyu Zhang , Timon Rabczuk

The computation of the distance of two time series is time-consuming for any elastic distance function that accounts for misalignments. Among those functions, DTW is the most prominent. However, a recent extensive evaluation has shown that…

Data Structures and Algorithms · Computer Science 2023-04-21 Jana Holznigenkemper , Christian Komusiewicz , Bernhard Seeger

Error-tolerant graph matching gathers an important family of problems. These problems aim at finding correspondences between two graphs while integrating an error model. In the Graph Edit Distance (GED) problem, the insertion/deletion of…

Discrete Mathematics · Computer Science 2021-04-19 Romain Raveaux

Emerging non-volatile main memory (NVRAM) technologies provide byte-addressability, low idle power, and improved memory-density, and are likely to be a key component in the future memory hierarchy. However, a critical challenge in achieving…

Data Structures and Algorithms · Computer Science 2019-08-22 Guy E. Blleloch , Yan Gu

The literature postulates that the dynamic time warping (dtw) distance can cope with temporal variations but stores and processes time series in a form as if the dtw-distance cannot cope with such variations. To address this inconsistency,…

Machine Learning · Computer Science 2019-03-11 Brijnesh Jain

Many modern data-intensive computational problems either require, or benefit from distance or similarity data that adhere to a metric. The algorithms run faster or have better performance guarantees. Unfortunately, in real applications, the…

Machine Learning · Statistics 2017-10-31 Anna C. Gilbert , Lalit Jain
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