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This paper presents ClinicSum, a novel framework designed to automatically generate clinical summaries from patient-doctor conversations. It utilizes a two-module architecture: a retrieval-based filtering module that extracts Subjective,…

Computation and Language · Computer Science 2024-12-06 Subash Neupane , Himanshu Tripathi , Shaswata Mitra , Sean Bozorgzad , Sudip Mittal , Shahram Rahimi , Amin Amirlatifi

Patients with low health literacy usually have difficulty understanding medical jargon and the complex structure of professional medical language. Although some studies are proposed to automatically translate expert language into…

Computation and Language · Computer Science 2024-02-09 Junyu Luo , Zifei Zheng , Hanzhong Ye , Muchao Ye , Yaqing Wang , Quanzeng You , Cao Xiao , Fenglong Ma

Objective. Natural language processing methods for medical auto-coding, or automatic generation of medical billing codes from electronic health records, generally assign each code independently of the others. They may thus assign codes for…

Computation and Language · Computer Science 2015-10-19 Michael Subotin , Anthony R. Davis

Early detection of preventable diseases is important for better disease management, improved inter-ventions, and more efficient health-care resource allocation. Various machine learning approacheshave been developed to utilize information…

Machine Learning · Computer Science 2018-08-16 Jingshu Liu , Zachariah Zhang , Narges Razavian

Image-guided drawing can compensate for the lack of skills but often requires a significant number of repetitive strokes to create textures. Existing automatic stroke synthesis methods are usually limited to predefined styles or require…

Graphics · Computer Science 2021-08-17 Yilan Chen , Kin Chung Kwan , Li-Yi Wei , Hongbo Fu

Brief Hospital Course (BHC) summaries are succinct summaries of an entire hospital encounter, embedded within discharge summaries, written by senior clinicians responsible for the overall care of a patient. Methods to automatically produce…

Computation and Language · Computer Science 2023-04-11 Thomas Searle , Zina Ibrahim , James Teo , Richard Dobson

Unstructured clinical notes contain essential patient information but are challenging for physicians to search and interpret efficiently. Although large language models (LLMs) have shown promise in question answering (QA), most existing…

Human-Computer Interaction · Computer Science 2025-05-27 Dina Albassam

In this work, we propose the use of a fully managed machine learning service, which utilizes active learning to directly build models from unstructured data. With this tool, business users can quickly and easily build machine learning…

Machine Learning · Computer Science 2021-02-02 Teja Kanchinadam , Qian You , Keith Westpfahl , James Kim , Siva Gunda , Sebastian Seith , Glenn Fung

Accurate and comprehensive clinical documentation is crucial for delivering high-quality healthcare, facilitating effective communication among providers, and ensuring compliance with regulatory requirements. However, manual transcription…

Computation and Language · Computer Science 2024-06-12 Anjanava Biswas , Wrick Talukdar

Despite advances in machine learning (ML) and large language models (LLMs), rule-based natural language processing (NLP) systems remain active in clinical settings due to their interpretability and operational efficiency. However, their…

Computation and Language · Computer Science 2025-06-23 Jianlin Shi , Brian T. Bucher

Medical imaging is widely used in clinical practice for diagnosis and treatment. Report-writing can be error-prone for unexperienced physicians, and time- consuming and tedious for experienced physicians. To address these issues, we study…

Computation and Language · Computer Science 2019-01-09 Baoyu Jing , Pengtao Xie , Eric Xing

A food composition knowledge base, which stores the essential phyto-, micro-, and macro-nutrients of foods is useful for both research and industrial applications. Although many existing knowledge bases attempt to curate such information,…

Computation and Language · Computer Science 2023-01-27 Jason Youn , Fangzhou Li , Ilias Tagkopoulos

The automated capturing and summarization of medical consultations has the potential to reduce the administrative burden in healthcare. Consultations are structured conversations that broadly follow a guideline with a systematic examination…

Software Engineering · Computer Science 2022-05-04 Omar ElAssy , Rik de Vendt , Fabiano Dalpiaz , Sjaak Brinkkemper

This article presents our steps to integrate complex and partly unstructured medical data into a clinical research database with subsequent decision support. Our main application is an integrated faceted search tool, accompanied by the…

Human-Computer Interaction · Computer Science 2018-10-31 Daniel Sonntag , Hans-Jürgen Profitlich

Business process modelers need to have expertise and knowledge of the domain that may not always be available to them. Therefore, they may benefit from tools that mine collections of existing processes and recommend element(s) to be added…

Software Engineering · Computer Science 2021-05-25 Maayan Goldstein , Cecilia Gonzalez-Alvarez

Case Report Forms (CRFs) are largely used in medical research as they ensure accuracy, reliability, and validity of results in clinical studies. However, publicly available, wellannotated CRF datasets are scarce, limiting the development of…

Computation and Language · Computer Science 2025-06-16 Pietro Ferrazzi , Alberto Lavelli , Bernardo Magnini

The automation of chest X-ray reporting has garnered significant interest due to the time-consuming nature of the task. However, the clinical accuracy of free-text reports has proven challenging to quantify using natural language processing…

Computer Vision and Pattern Recognition · Computer Science 2023-05-03 Matthias Keicher , Kamilia Zaripova , Tobias Czempiel , Kristina Mach , Ashkan Khakzar , Nassir Navab

Automatically generating accurate summaries from clinical reports could save a clinician's time, improve summary coverage, and reduce errors. We propose a sequence-to-sequence abstractive summarization model augmented with domain-specific…

Computation and Language · Computer Science 2019-05-16 Sean MacAvaney , Sajad Sotudeh , Arman Cohan , Nazli Goharian , Ish Talati , Ross W. Filice

The current mode of use of Electronic Health Record (EHR) elicits text redundancy. Clinicians often populate new documents by duplicating existing notes, then updating accordingly. Data duplication can lead to a propagation of errors,…

Computation and Language · Computer Science 2023-02-28 Thomas Searle , Zina Ibrahim , James Teo , Richard JB Dobson

Mainstream knowledge management researchers generally agree that knowledge extracted from unstructured data and semi-structured data have become imperative for organizational strategic decision making. In this research, we develop a…

Information Retrieval · Computer Science 2020-07-15 Gerald Onwujekwe , Kweku-Muata Osei-Bryson , Nnatubemugo Ngwum