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Fluid-structure interaction (FSI) simulation of biological systems presents significant computational challenges, particularly for applications involving large structural deformations and contact mechanics, such as heart valve dynamics.…

Quantitative Methods · Quantitative Biology 2026-02-13 Ryan T. Black , Steve A. Maas , Wensi Wu , Jalaj Maheshwari , Tzanio Kolev , Jeffrey A. Weiss , Matthew A. Jolley

The development of fluid-structure interaction (FSI) software involves trade-offs between ease of use, generality, performance, and cost. Typically there are large learning curves when using low-level software to model the interaction of an…

Fluid Dynamics · Physics 2017-04-24 Nicholas A. Battista , W. Christopher Strickland , Laura A. Miller

Particle-laden flows occur in a wide range of disciplines, from atmospheric flows to renewable energy to turbomachinery. They generally pose a challenging environment for the numerical prediction of particle-induced phenomena due to their…

Computational Physics · Physics 2023-05-17 Patrick Kopper , Anna Schwarz , Stephen M. Copplestone , Philip Ortwein , Stephan Staudacher , Andrea Beck

The use of reduced and mixed precision computing has gained increasing attention in high-performance computing (HPC) as a means to improve computational efficiency, particularly on modern hardware architectures like GPUs. In this work, we…

Computational Engineering, Finance, and Science · Computer Science 2025-05-28 Bálint Siklósi , Pushpender K. Sharma , David J. Lusher , István Z. Reguly , Neil D. Sandham

OpenCL is an open standard for parallel programming of heterogeneous compute devices, such as GPUs, CPUs, DSPs or FPGAs. However, the verbosity of its C host API can hinder application development. In this paper we present cf4ocl, a…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-05-16 Nuno Fachada , Vitor V. Lopes , Rui C. Martins , Agostinho C. Rosa

Simflowny is an open platform which automatically generates efficient parallel code of scientific dynamical models for different simulation frameworks. Here we present major upgrades on this software to support simultaneously a quite…

Computational Physics · Physics 2020-12-02 C. Palenzuela , B. Miñano , A. Arbona , C. Bona-Casas , C. Bona , J. Massó

Massively parallel accelerators such as GPGPUs, manycores and FPGAs represent a powerful and affordable tool for scientists who look to speed up simulations of complex systems. However, porting code to such devices requires a detailed…

Mathematical Software · Computer Science 2017-11-15 Wim Vanderbauwhede , Gavin Davidson

We present a computational method for extreme-scale simulations of incompressible turbulent wall flows at high Reynolds numbers. The numerical algorithm extends a popular method for solving second-order finite differences Poisson/Helmholtz…

Fluid Dynamics · Physics 2025-08-07 Rafael Diez Sanhueza , Jurriaan Peeters , Pedro Costa

In order to prevent velocity, pressure, and temperature spikes at material discontinuities occurring when the interface-capturing schemes inconsistently simulate compressible multi-material flows(when the specific heats ratio is…

Computational Physics · Physics 2020-12-29 Zhiwei He , Yousheng Zhang , Li Li , Baolin Tian

In this paper we would like to share our experience for transforming a parallel code for a Computational Fluid Dynamics (CFD) problem into a parallel version for the RedisDG workflow engine. This system is able to capture heterogeneous and…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-05-25 Fayssal Benkhaldoun , Christophe Cérin , Imad Kissami , Walid Saad

We propose a method for reducing the spatial discretization error of coarse computational fluid dynamics (CFD) problems by enhancing the quality of low-resolution simulations using deep learning. We feed the model with fine-grid data after…

Machine Learning · Computer Science 2024-09-27 Jesus Gonzalez-Sieiro , David Pardo , Vincenzo Nava , Victor M. Calo , Markus Towara

We present ShapeFlow, a dynamic abstract interpreter for TensorFlow which quickly catches tensor shape incompatibility errors, one of the most common bugs in deep learning code. ShapeFlow shares the same APIs as TensorFlow but only captures…

Machine Learning · Computer Science 2020-11-30 Sahil Verma , Zhendong Su

The pervasive adoption of Deep Learning (DL) and Graph Processing (GP) makes it a de facto requirement to build large-scale clusters of heterogeneous accelerators including GPUs and FPGAs. The OpenCL programming framework can be used on the…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-05-19 Yao Chen , Xin Long , Jiong He , Yuhang Chen , Hongshi Tan , Zhenxiang Zhang , Marianne Winslett , Deming Chen

Modern graphics processing units (GPUs) lead to a major increase in the performance of the computation of astrophysical simulations. Owing to the different nature of GPU architecture compared to traditional central processing units (CPUs)…

Earth and Planetary Astrophysics · Physics 2016-04-13 Christoph M. Schäfer , Sven Riecker , Thomas I. Maindl , Roland Speith , Samuel Scherrer , Wilhelm Kley

Graphs model several real-world phenomena. With the growth of unstructured and semi-structured data, parallelization of graph algorithms is inevitable. Unfortunately, due to inherent irregularity of computation, memory access, and…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-05-08 Nibedita Behera , Ashwina Kumar , Ebenezer Rajadurai T , Sai Nitish , Rajesh Pandian M , Rupesh Nasre

CG-Kit is a new code generation toolkit that we propose as a solution for portability and maintainability for scientific computing applications. The development of CG-Kit is rooted in the urgent need created by the shifting landscape of…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-01-09 Johann Rudi , Youngjun Lee , Aidan H. Chadha , Mohamed Wahib , Klaus Weide , Jared P. O'Neal , Anshu Dubey

Computational load imbalance is a well-known performance issue in multiprocessor reacting flow simulations utilizing directly integrated chemical kinetics. We introduce an open-source dynamic load balancing model named DLBFoam to address…

Fluid Dynamics · Physics 2021-06-29 Bulut Tekgül , Petteri Peltonen , Heikki Kahila , Ossi Kaario , Ville Vuorinen

We describe a newly developed hydrodynamic code for studying accretion disk processes. The numerical method uses a finite volume, nonlinear, Total Variation Diminishing (TVD) scheme to capture shocks and control spurious oscillations. It is…

Astrophysics · Physics 2008-12-18 L. R. Mudryk , N. W. Murray

A series of third- and fifth-order hybrid compact least-squares central weighted essentially non-oscillatory schemes are proposed and applied to curvilinear structured grids for the finite volume method. In smooth regions, compact…

Fluid Dynamics · Physics 2025-08-05 Jianhua Pan , Luxin Li , Ji Yin , Wei-Gang Zeng

To address the dual challenges of performance portability across heterogeneous hardware and the high usability barriers of conventional computational fluid dynamics (CFD) software, this paper introduces FEALPy.CFD, a high performance,…

Fluid Dynamics · Physics 2026-05-26 Wang Pengxiang , Huang Xianbo , Peng Li , Wei Huayi