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To address the challenge of performance analysis on the US DOE's forthcoming exascale supercomputers, Rice University has been extending its HPCToolkit performance tools to support measurement and analysis of GPU-accelerated applications.…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-09-16 Keren Zhou , Laksono Adhianto , Jonathon Anderson , Aaron Cherian , Dejan Grubisic , Mark Krentel , Yumeng Liu , Xiaozhu Meng , John Mellor-Crummey

3D intelligence leverages rich 3D features and stands as a promising frontier in AI, with 3D rendering fundamental to many downstream applications. 3D Gaussian Splatting (3DGS), an emerging high-quality 3D rendering method, requires…

Graphics · Computer Science 2025-04-14 Sixu Li , Ben Keller , Yingyan Celine Lin , Brucek Khailany

Machine learning algorithms are becoming increasingly prevalent and performant in the reconstruction of events in accelerator-based neutrino experiments. These sophisticated algorithms can be computationally expensive. At the same time, the…

This letter introduces DiffAero, a lightweight, GPU-accelerated, and fully differentiable simulation framework designed for efficient quadrotor control policy learning. DiffAero supports both environment-level and agent-level parallelism…

Robotics · Computer Science 2025-09-15 Xinhong Zhang , Runqing Wang , Yunfan Ren , Jian Sun , Hao Fang , Jie Chen , Gang Wang

The identification, and subsequent discovery, of fast radio transients through blind-search surveys requires a large amount of processing power, in worst cases scaling as $\mathcal{O}(N^3)$. For this reason, survey data are generally…

Instrumentation and Methods for Astrophysics · Physics 2014-02-04 Alessio Magro , Aris Karastergiou , Stefano Salvini , Benjamin Mort , Fred Dulwich , Kristian Zarb Adami

The study of binary pulsars enables tests of general relativity. Orbital motion in binary systems causes the apparent pulsar spin frequency to drift, reducing the sensitivity of periodicity searches. Acceleration searches are methods that…

Instrumentation and Methods for Astrophysics · Physics 2018-12-12 Sofia Dimoudi , Karel Adamek , Prabu Thiagaraj , Scott M. Ransom , Aris Karastergiou , Wesley Armour

Differentiable simulation of soft bodies is a foundation for system identification, trajectory optimization, and Real2Sim transfer. Yet, existing methods such as the differentiable Projective Dynamics (DiffPD) struggle when faced with…

We present PEANUT (ParallEl AligNment UTility), a highly parallel GPU-based read mapper with several distinguishing features, including a novel q-gram index (called the q-group index) with small memory footprint built on-the-fly over the…

Data Structures and Algorithms · Computer Science 2014-03-10 Johannes Köster , Sven Rahmann

The risk of reinsurance portfolios covering globally occurring natural catastrophes, such as earthquakes and hurricanes, is quantified by employing simulations. These simulations are computationally intensive and require large amounts of…

Distributed, Parallel, and Cluster Computing · Computer Science 2015-02-04 Blesson Varghese

Graphics Processing Unit, or GPUs, have been successfully adopted both for graphic computation in 3D applications, and for general purpose application (GP-GPUs), thank to their tremendous performance-per-watt. Recently, there is a big…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-10-03 Paolo Burgio

Usage of GPUs as co-processors is a well-established approach to accelerate costly algorithms operating on matrices and vectors. We aim to further improve the performance of the Global Neutrino Analysis framework (GNA) by adding GPU support…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-04-23 Anna Fatkina , Maxim Gonchar , Liudmila Kolupaeva , Dmitry Naumov , Konstantin Treskov

Open-source simulation tools play a crucial role for neuromorphic application engineers and hardware architects to investigate performance bottlenecks and explore design optimizations before committing to silicon. Reconfigurable…

Emerging Technologies · Computer Science 2024-04-26 Sahil Hassan , Michael Inouye , Miguel C. Gonzalez , Ilkin Aliyev , Joshua Mack , Maisha Hafiz , Ali Akoglu

Accurately predicting phonon scattering is crucial for understanding thermal transport properties. However, the computational cost of such calculations, especially for four-phonon scattering, can often be more prohibitive when large number…

Materials Science · Physics 2025-10-02 Ziqi Guo , Xiulin Ruan , Guang Lin

Subgraph matching is a core operation in graph analytics, supporting a broad spectrum of applications from social network analysis to bioinformatics. Recent GPU-based approaches accelerate subgraph matching by leveraging parallelism but…

Databases · Computer Science 2026-04-14 Weitian Chen , Shixuan Sun , Cheng Chen , Yongmin Hu , Yingqian Hu , Minyi Guo

The rapidly growing popularity and scale of data-parallel workloads demand a corresponding increase in raw computational power of GPUs (Graphics Processing Units). As single-GPU systems struggle to satisfy the performance demands, multi-GPU…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-11-15 Yifan Sun , Trinayan Baruah , Saiful A. Mojumder , Shi Dong , Rafael Ubal , Xiang Gong , Shane Treadway , Yuhui Bao , Vincent Zhao , José L. Abellán , John Kim , Ajay Joshi , David Kaeli

Effective performance profiling and analysis are essential for optimizing training and inference of deep learning models, especially given the growing complexity of heterogeneous computing environments. However, existing tools often lack…

Performance · Computer Science 2024-11-06 Qidong Zhao , Hao Wu , Yuming Hao , Zilingfeng Ye , Jiajia Li , Xu Liu , Keren Zhou

Modern heterogeneous high-performance computing (HPC) systems powered by advanced graphics processing unit (GPU) architectures enable accelerating computing with unprecedented performance and scalability. Here, we present a GPU-accelerated…

Computational Physics · Physics 2025-12-29 Johanne Elise Vembe , Marcin Krotkiewski , Magnar Bjørgve , Morten Førre , Hicham Agueny

Geospatial Processing, such as queries based on point-to-polyline shortest distance and point-in-polygon test, are fundamental to many scientific and engineering applications, including post-processing large-scale environmental and climate…

Databases · Computer Science 2014-03-05 Jianting Zhang Simin You

Adaptive finite elements combined with geometric multigrid solvers are one of the most efficient numerical methods for problems such as the instationary Navier-Stokes equations. Yet despite their efficiency, computations remain expensive…

Numerical Analysis · Mathematics 2025-12-23 Manuel Liebchen , Robert Jendersie , Utku Kaya , Christian Lessig , Thomas Richter

The reliability of cardiovascular computational models depends on the accurate solution of the hemodynamics, the realistic characterization of the hyperelastic and electric properties of the tissues along with the correct description of…