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This paper considers the problem of undersampled MRI reconstruction. We propose a novel Transformer-based framework for directly processing signal in k-space, going beyond the limitation of regular grids as ConvNets do. We adopt an implicit…

Image and Video Processing · Electrical Eng. & Systems 2022-11-11 Ziheng Zhao , Tianjiao Zhang , Weidi Xie , Yanfeng Wang , Ya Zhang

Purpose: A fast data-driven optimization approach, named bias-accelerated subset selection (BASS), is proposed for learning efficacious sampling patterns (SPs) with the purpose of reducing scan time in large-dimensional parallel MRI.…

Signal Processing · Electrical Eng. & Systems 2020-11-05 Marcelo V. W. Zibetti , Gabor T. Herman , Ravinder R. Regatte

Optimizing 3D k-space sampling trajectories for efficient MRI is important yet challenging. This work proposes a generalized framework for optimizing 3D non-Cartesian sampling patterns via data-driven optimization. We built a differentiable…

Signal Processing · Electrical Eng. & Systems 2022-09-23 Guanhua Wang , Jon-Fredrik Nielsen , Jeffrey A. Fessler , Douglas C. Noll

Quantitative imaging in MRI usually involves acquisition and reconstruction of a series of images at multi-echo time points, which possibly requires more scan time and specific reconstruction technique compared to conventional qualitative…

Signal Processing · Electrical Eng. & Systems 2021-03-11 Jinwei Zhang , Hang Zhang , Chao Li , Pascal Spincemaille , Mert Sabuncu , Thanh D. Nguyen , Yi Wang

Recent studies on T1-assisted MRI reconstruction for under-sampled images of other modalities have demonstrated the potential of further accelerating MRI acquisition of other modalities. Most of the state-of-the-art approaches have achieved…

Image and Video Processing · Electrical Eng. & Systems 2021-11-15 Junwei Yang , Xiao-Xin Li , Feihong Liu , Dong Nie , Pietro Lio , Haikun Qi , Dinggang Shen

Quantitative susceptibility mapping (QSM) involves acquisition and reconstruction of a series of images at multi-echo time points to estimate tissue field, which prolongs scan time and requires specific reconstruction technique. In this…

Image and Video Processing · Electrical Eng. & Systems 2022-11-03 Jinwei Zhang , Pascal Spincemaille , Hang Zhang , Thanh D. Nguyen , Chao Li , Jiahao Li , Ilhami Kovanlikaya , Mert R. Sabuncu , Yi Wang

Undersampling k-space data in MRI reduces scan time but pose challenges in image reconstruction. Considerable progress has been made in reconstructing accelerated MRI. However, restoration of high-frequency image details in highly…

Image and Video Processing · Electrical Eng. & Systems 2024-01-17 Liping Zhang , Xiaobo Li , Weitian Chen

Accelerated Magnetic Resonance Imaging (MRI) requires careful optimization of k-space sampling patterns to balance acquisition speed and image quality. While recent advances in deep learning have shown promise in optimizing Cartesian…

Tissues and Organs · Quantitative Biology 2025-08-15 Ruru Xu , Ilkay Oksuz

Deep algorithm unrolling has emerged as a powerful model-based approach to develop deep architectures that combine the interpretability of iterative algorithms with the performance gains of supervised deep learning, especially in cases of…

Computer Vision and Pattern Recognition · Computer Science 2021-09-30 Yair Ben Sahel , John P. Bryan , Brian Cleary , Samouil L. Farhi , Yonina C. Eldar

Magnetic resonance imaging (MRI) is a powerful medical imaging modality, but long acquisition times limit throughput, patient comfort, and clinical accessibility. Diffusion-based generative models serve as strong image priors for reducing…

Machine Learning · Computer Science 2026-02-13 Sriram Ravula , Brett Levac , Yamin Arefeen , Ajil Jalal , Alexandros G. Dimakis , Jonathan I. Tamir

Modern low-field magnetic resonance imaging (MRI) technology offers a compelling alternative to standard high-field MRI, with portable, low-cost systems. However, its clinical utility is limited by a low Signal-to-Noise Ratio (SNR), which…

Image and Video Processing · Electrical Eng. & Systems 2026-05-13 Tal Oved , Efrat Shimron

This dissertation is devoted to provide advanced nonconvex nonsmooth variational models of (Magnetic Resonance Image) MRI reconstruction, efficient learnable image reconstruction algorithms and parameter training algorithms that improve the…

Optimization and Control · Mathematics 2023-03-06 Wanyu Bian

Magnetic Resonance Imaging (MRI) represents an important diagnostic modality; however, its inherently slow acquisition process poses challenges in obtaining fully-sampled $k$-space data under motion. In the absence of fully-sampled…

Image and Video Processing · Electrical Eng. & Systems 2024-12-23 George Yiasemis , Nikita Moriakov , Clara I. Sánchez , Jan-Jakob Sonke , Jonas Teuwen

Objective: To propose and validate an unsupervised MRI reconstruction method that does not require fully sampled k-space data. Materials and Methods: The proposed method, deep image prior with structured sparsity (DISCUS), extends the deep…

Image and Video Processing · Electrical Eng. & Systems 2025-05-30 Muhammad Ahmad Sultan , Chong Chen , Yingmin Liu , Katarzyna Gil , Karolina Zareba , Rizwan Ahmad

Magnetic resonance imaging (MRI) is a crucial tool for clinical diagnosis while facing the challenge of long scanning time. To reduce the acquisition time, fast MRI reconstruction aims to restore high-quality images from the undersampled…

Image and Video Processing · Electrical Eng. & Systems 2025-03-14 Yucong Meng , Zhiwei Yang , Minghong Duan , Yonghong Shi , Zhijian Song

A central limitation of multiple-acquisition magnetic resonance imaging (MRI) is the degradation in scan efficiency as the number of distinct datasets grows. Sparse recovery techniques can alleviate this limitation via randomly undersampled…

Image and Video Processing · Electrical Eng. & Systems 2017-10-03 L Kerem Senel , Toygan Kilic , Alper Gungor , Emre Kopanoglu , H Emre Guven , Emine U Saritas , Aykut Koc , Tolga Cukur

A method for perfusion imaging with DCE-MRI is developed based on two popular paradigms: the low-rank + sparse model for optimisation-based reconstruction, and the deep unfolding. A learnable algorithm derived from a proximal algorithm is…

Signal Processing · Electrical Eng. & Systems 2024-10-28 Ondřej Mokrý , Jiří Vitouš , Pavel Rajmic , Radovan Jiřík

Purpose: This work aims at developing a generalizable MRI reconstruction model in the meta-learning framework. The standard benchmarks in meta-learning are challenged by learning on diverse task distributions. The proposed network learns…

Computer Vision and Pattern Recognition · Computer Science 2021-10-05 Wanyu Bian , Yunmei Chen , Xiaojing Ye , Qingchao Zhang

We went below the MRI acceleration factors (a.k.a., k-space undersampling) reported by all published papers that reference the original fastMRI challenge, and then considered powerful deep learning based image enhancement methods to…

Computer Vision and Pattern Recognition · Computer Science 2021-10-01 Aleksandr Belov , Joel Stadelmann , Sergey Kastryulin , Dmitry V. Dylov

In the area of magnetic resonance imaging (MRI), an extensive range of non-linear reconstruction algorithms have been proposed that can be used with general Fourier subsampling patterns. However, the design of these subsampling patterns has…

Image and Video Processing · Electrical Eng. & Systems 2018-05-04 Baran Gözcü , Rabeeh Karimi Mahabadi , Yen-Huan Li , Efe Ilıcak , Tolga Çukur , Jonathan Scarlett , Volkan Cevher