Related papers: Internal Quasiperiod Queries
The rank problem in succinct data structures asks to preprocess an array A[1..n] of bits into a data structure using as close to n bits as possible, and answer queries of the form rank(k) = Sum_{i=1}^k A[i]. The problem has been intensely…
We consider the problem of computing a shortest solid cover of an indeterminate string. An indeterminate string may contain non-solid symbols, each of which specifies a subset of the alphabet that could be present at the corresponding…
Quantum query complexity is typically characterized in terms of XOR queries |x,y> to |x,y+f(x)> or phase queries, which ensure that even queries to non-invertible functions are unitary. When querying a permutation, another natural model is…
We revisit the range $\tau$-majority problem, which asks us to preprocess an array $A[1..n]$ for a fixed value of $\tau \in (0,1/2]$, such that for any query range $[i,j]$ we can return a position in $A$ of each distinct $\tau$-majority…
We present the first $\mathrm{o}(n)$-space polynomial-time algorithm for computing the length of a longest common subsequence. Given two strings of length $n$, the algorithm runs in $\mathrm{O}(n^{3})$ time with $\mathrm{O}\left(\frac{n…
We revisit the classic border tree data structure [Gu, Farach, Beigel, SODA 1994] that answers the following prefix-suffix queries on a string $T$ of length $n$ over an integer alphabet $\Sigma=[0,\sigma)$: for any $i,j \in [0,n)$ return…
Given a dataset of $n$ user-contributed strings, each of length at most $\ell$, a key problem is how to identify all frequent substrings while preserving each user's privacy. Recent work by Bernardini et al. (PODS'25) introduced a…
For every fixed $d \in \mathbb{N}$, we design a data structure that represents a binary $n \times n$ matrix that is $d$-twin-ordered. The data structure occupies $O_d(n)$ bits, which is the least one could hope for, and can be queried for…
We present new and improved data structures that answer exact node-to-node distance queries in planar graphs. Such data structures are also known as distance oracles. For any directed planar graph on n nodes with non-negative lengths we…
We report the first improvement in the space-time trade-off of lower bounds for the orthogonal range searching problem in the semigroup model, since Chazelle's result from 1990. This is one of the very fundamental problems in range…
Motivated by the imminent growth of massive, highly redundant genomic databases, we study the problem of compressing a string database while simultaneously supporting fast random access, substring extraction and pattern matching to the…
Various grammar compression algorithms have been proposed in the last decade. A grammar compression is a restricted CFG deriving the string deterministically. An efficient grammar compression develops a smaller CFG by finding duplicated…
We consider a range-search variant of the closest-pair problem. Let $\varGamma$ be a fixed shape in the plane. We are interested in storing a given set of $n$ points in the plane in some data structure such that for any specified translate…
We study the classical approximate string matching problem, that is, given strings $P$ and $Q$ and an error threshold $k$, find all ending positions of substrings of $Q$ whose edit distance to $P$ is at most $k$. Let $P$ and $Q$ have…
We describe the first strongly subquadratic time algorithm with subexponential approximation ratio for approximately computing the Fr\'echet distance between two polygonal chains. Specifically, let $P$ and $Q$ be two polygonal chains with…
Recently, Czumaj et.al. (arXiv 2017) presented a parallel (almost) $2$-approximation algorithm for the maximum matching problem in only $O({(\log\log{n})^2})$ rounds of the massive parallel computation (MPC) framework, when the memory per…
Let $P$ be a set of $n$ points in an axis-parallel rectangle $B$ in the plane. We present an $O(n\alpha(n)\log^4 n)$-time algorithm to preprocess $P$ into a data structure of size $O(n\alpha(n)\log^3 n)$, such that, given a query point $q$,…
Reverse nearest neighbor queries are defined as follows: Given an input point-set P, and a query point q, find all the points p in P whose nearest point in P U {q} \ {p} is q. We give a data structure to answer reverse nearest neighbor…
We study the problem of computing a longest increasing subsequence in a sequence $S$ of $n$ distinct elements in the presence of persistent comparison errors. In this model, every comparison between two elements can return the wrong result…
Several biological problems require the identification of regions in a sequence where some feature occurs within a target density range: examples including the location of GC-rich regions, identification of CpG islands, and sequence…