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We propose a new variant of nonnegative matrix factorization (NMF), combining separability and sparsity assumptions. Separability requires that the columns of the first NMF factor are equal to columns of the input matrix, while sparsity…

Machine Learning · Computer Science 2020-06-16 Nicolas Nadisic , Arnaud Vandaele , Jeremy E. Cohen , Nicolas Gillis

In this paper, we propose a new low-rank matrix factorization model dubbed bounded simplex-structured matrix factorization (BSSMF). Given an input matrix $X$ and a factorization rank $r$, BSSMF looks for a matrix $W$ with $r$ columns and a…

Machine Learning · Computer Science 2023-07-26 Olivier Vu Thanh , Nicolas Gillis , Fabian Lecron

Simplex-structured matrix factorization (SSMF) is a generalization of nonnegative matrix factorization, a fundamental interpretable data analysis model, and has applications in hyperspectral unmixing and topic modeling. To obtain…

Numerical Analysis · Mathematics 2025-01-10 Maryam Abdolali , Giovanni Barbarino , Nicolas Gillis

Nonnegative matrix factorization arises widely in machine learning and data analysis. In this paper, for a given factorization of rank r, we consider the sparse stochastic matrix factorization (SSMF) of decomposing a prescribed m-by-n…

Numerical Analysis · Mathematics 2022-07-19 Guiyun Xiao , Zheng-Jian Bai , Wai-Ki Ching

Sparse matrix factorization is the problem of approximating a matrix $\mathbf{Z}$ by a product of $J$ sparse factors $\mathbf{X}^{(J)} \mathbf{X}^{(J-1)} \ldots \mathbf{X}^{(1)}$. This paper focuses on identifiability issues that appear in…

Machine Learning · Computer Science 2021-11-18 Léon Zheng , Elisa Riccietti , Rémi Gribonval

Similarity matrix serves as a fundamental tool at the core of numerous downstream machine-learning tasks. However, missing data is inevitable and often results in an inaccurate similarity matrix. To address this issue, Similarity Matrix…

Machine Learning · Computer Science 2024-10-01 Changyi Ma , Runsheng Yu , Xiao Chen , Youzhi Zhang

We propose a unified framework to speed up the existing stochastic matrix factorization (SMF) algorithms via variance reduction. Our framework is general and it subsumes several well-known SMF formulations in the literature. We perform a…

Machine Learning · Statistics 2017-05-23 Renbo Zhao , William B. Haskell , Jiashi Feng

Simplex-structured matrix factorization (SSMF) is a common task encountered in signal processing and machine learning. Minimum-volume constrained unmixing (MVCU) algorithms are among the most widely used methods to perform this task. While…

Supervised matrix factorization (SMF) is a classical machine learning method that simultaneously seeks feature extraction and classification tasks, which are not necessarily a priori aligned objectives. Our goal is to use SMF to learn…

Machine Learning · Statistics 2023-11-21 Joowon Lee , Hanbaek Lyu , Weixin Yao

Nonnegative matrix factorization (NMF) is a linear dimensionality reduction technique for nonnegative data, with applications such as hyperspectral unmixing and topic modeling. NMF is a difficult problem in general (NP-hard), and its…

Numerical Analysis · Mathematics 2025-11-11 Junjun Pan , Valentin Leplat , Michael Ng , Nicolas Gillis

Symmetric Nonnegative Matrix Factorization (SNMF) models arise naturally as simple reformulations of many standard clustering algorithms including the popular spectral clustering method. Recent work has demonstrated that an elementary…

Computer Vision and Pattern Recognition · Computer Science 2016-09-20 Reza Borhani , Jeremy Watt , Aggelos Katsaggelos

Non-negative Matrix Factorization (NMF) is a useful method to extract features from multivariate data, but an important and sometimes neglected concern is that NMF can result in non-unique solutions. Often, there exist a Set of Feasible…

Applications · Statistics 2021-01-20 Ragnhild Laursen , Asger Hobolth

Symmetric nonnegative matrix factorization (SNMF) has demonstrated to be a powerful method for data clustering. However, SNMF is mathematically formulated as a non-convex optimization problem, making it sensitive to the initialization of…

Machine Learning · Computer Science 2021-03-03 Yuheng Jia , Hui Liu , Junhui Hou , Sam Kwong , Qingfu Zhang

Semi-supervised symmetric non-negative matrix factorization (SNMF) utilizes the available supervisory information (usually in the form of pairwise constraints) to improve the clustering ability of SNMF. The previous methods introduce the…

Machine Learning · Computer Science 2024-10-29 Yuheng Jia , Jia-Nan Li , Wenhui Wu , Ran Wang

Nonnegative matrix factorization (NMF) has become a very popular technique in machine learning because it automatically extracts meaningful features through a sparse and part-based representation. However, NMF has the drawback of being…

Machine Learning · Statistics 2012-12-07 Nicolas Gillis

The proposed article aims at offering a comprehensive tutorial for the computational aspects of structured matrix and tensor factorization. Unlike existing tutorials that mainly focus on {\it algorithmic procedures} for a small set of…

Signal Processing · Electrical Eng. & Systems 2023-07-19 Xiao Fu , Nico Vervliet , Lieven De Lathauwer , Kejun Huang , Nicolas Gillis

Coupled decompositions are a widely used tool for data fusion. As the volume of data increases, so does the dimensionality of matrices and tensors, highlighting the need for more efficient coupled decomposition algorithms. This paper…

Numerical Analysis · Mathematics 2026-04-22 Erna Begovic , Anita Carevic , Ivana Sain Glibic

We present a matrix-factorization algorithm that scales to input matrices with both huge number of rows and columns. Learned factors may be sparse or dense and/or non-negative, which makes our algorithm suitable for dictionary learning,…

Machine Learning · Statistics 2017-11-15 Arthur Mensch , Julien Mairal , Bertrand Thirion , Gael Varoquaux

Nonnegative matrix factorization (NMF) is widely used for clustering with strong interpretability. Among general NMF problems, symmetric NMF is a special one that plays an important role in graph clustering where each element measures the…

Machine Learning · Computer Science 2023-11-07 Mengyuan Zhang , Kai Liu

Non-negative matrix factorization (NMF) is a natural model of admixture and is widely used in science and engineering. A plethora of algorithms have been developed to tackle NMF, but due to the non-convex nature of the problem, there is…

Machine Learning · Computer Science 2015-07-09 Rong Ge , James Zou
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