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Networks or graphs are widely used across the sciences to represent relationships of many kinds. igraph (https://igraph.org) is a general-purpose software library for graph construction, analysis, and visualisation, combining fast and…

We present Glyph - a Python package for genetic programming based symbolic regression. Glyph is designed for usage let by numerical simulations let by real world experiments. For experimentalists, glyph-remote provides a separation of…

Mathematical Software · Computer Science 2018-03-22 Markus Quade , Julien Gout , Markus Abel

In this short article I introduce the spray package, which provides some functionality for handling sparse arrays. The package uses the C++ Standard Template Library's map class to store and retrieve elements. One natural application for…

Symbolic Computation · Computer Science 2022-10-21 Robin K. S. Hankin

Internet Message Access Protocol (IMAP) clients are a common feature in several programming languages. Despite having some packages for electronic messages retrieval, the R language, until recently, lacked a broader solution, capable of…

Networking and Internet Architecture · Computer Science 2023-01-10 Allan V. C. Quadros

A software package has been developed to bridge the R analysis model with the conceptual analysis environment typical of radiation physics experiments. The new package has been used in the context of a project for the validation of…

Computational Physics · Physics 2013-11-25 Andreas Pfeiffer , Maria Grazia Pia

We introduce Graph Neural Processes (GNP), inspired by the recent work in conditional and latent neural processes. A Graph Neural Process is defined as a Conditional Neural Process that operates on arbitrary graph data. It takes features of…

Machine Learning · Computer Science 2019-10-03 Andrew Carr , David Wingate

Graph signals are widely used to describe vertex attributes or features in graph-structured data, with applications spanning the internet, social media, transportation, sensor networks, and biomedicine. Graph signal processing (GSP) has…

Signal Processing · Electrical Eng. & Systems 2025-05-22 Yu Zhang , Linyu Peng , Bing-Zhao Li

stCEG is an R package which allows a user to fully specify a Chain Event Graph (CEG) model from data and to produce interactive plots. It includes functions for the user to visualise spatial variables they wish to include in the model.…

Computation · Statistics 2025-07-10 Hollie Calley , Daniel Williamson

The R package GFA provides a full pipeline for factor analysis of multiple data sources that are represented as matrices with co-occurring samples. It allows learning dependencies between subsets of the data sources, decomposed into latent…

Mathematical Software · Computer Science 2016-11-08 Eemeli Leppäaho , Muhammad Ammad-ud-din , Samuel Kaski

Graph Signal Processing generalizes classical signal processing to signal or data indexed by the vertices of a weighted graph. So far, the research efforts have been focused on static graph signals. However numerous applications involve…

Machine Learning · Computer Science 2016-06-22 Francesco Grassi , Nathanael Perraudin , Benjamin Ricaud

Representation learning algorithms automatically learn the features of data. Several representation learning algorithms for graph data, such as DeepWalk, node2vec, and GraphSAGE, sample the graph to produce mini-batches that are suitable…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-05-12 Abhinav Jangda , Sandeep Polisetty , Arjun Guha , Marco Serafini

This short paper gives an introduction to the \emph{rcss} package. The R package \emph{rcss} provides users with a tool to approximate the value functions in the Bellman recursion using convex piecewise linear functions formed using…

Mathematical Software · Computer Science 2018-01-19 Juri Hinz , Jeremy Yee

On the Euclidean domains of classical signal processing, linking of signal samples to the underlying coordinate structure is straightforward. While graph adjacency matrices totally define the quantitative associations among the underlying…

Signal Processing · Electrical Eng. & Systems 2021-06-07 Aykut Koç , Yigit E. Bayiz

As graph analytics often involves compute-intensive operations, GPUs have been extensively used to accelerate the processing. However, in many applications such as social networks, cyber security, and fraud detection, their representative…

Data Structures and Algorithms · Computer Science 2018-06-28 Mo Sha , Yuchen Li , Bingsheng He , Kian-Lee Tan

Graph signal processing is an emerging field which aims to model processes that exist on the nodes of a network and are explained through diffusion over this structure. Graph signal processing works have heretofore assumed knowledge of the…

Signal Processing · Electrical Eng. & Systems 2021-04-21 Matthew W. Morency , Geert Leus

It is shown how to set up, conduct, and analyze large simulation studies with the new R package simsalapar = simulations simplified and launched parallel. A simulation study typically starts with determining a collection of input variables…

Computation · Statistics 2013-09-18 Marius Hofert , Martin Mächler

In computer science, a preprocessor (or macro processor) is a tool that programatically alters its input, typically on the basis of inline annotations, to produce data that serves as input for another program. Preprocessors are used in…

Programming Languages · Computer Science 2020-08-04 Tristan Miller , Denis Auroux

The focus of Part I of this monograph has been on both the fundamental properties, graph topologies, and spectral representations of graphs. Part II embarks on these concepts to address the algorithmic and practical issues centered round…

Information Theory · Computer Science 2019-09-24 Ljubisa Stankovic , Danilo Mandic , Milos Dakovic , Milos Brajovic , Bruno Scalzo , Anthony G. Constantinides

Signal processing over graphs has recently attracted significant attentions for dealing with structured data. Normal graphs, however, only model pairwise relationships between nodes and are not effective in representing and capturing some…

Signal Processing · Electrical Eng. & Systems 2020-06-05 Songyang Zhang , Zhi Ding , Shuguang Cui

IGraph/M is an efficient general purpose graph theory and network analysis package for Mathematica. IGraph/M serves as the Wolfram Language interfaces to the igraph C library, and also provides several unique pieces of functionality not yet…

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