Related papers: Merge trees in discrete Morse theory
In this paper, we study the computation of optimal discrete Morse functions on stratifolds. In particular, we present an algorithm that efficiently computes such functions for a broad class of them. Moreover, we characterize the conditions…
We consider a probability distribution on the set of Boolean functions in n variables which is induced by random Boolean expressions. Such an expression is a random rooted plane tree where the internal vertices are labelled with connectives…
Discrete Morse theory, a cell complex-analog to smooth Morse theory, has been developed over the past few decades since its original formulation by Robin Forman in 1998. In particular, discrete gradient vector fields on simplicial complexes…
This work addresses the intrinsic relationship between trees and networks (i.e. graphs). A complete (invertible) mapping is presented which allows trees to be mapped into weighted graphs and then backmapped into the original tree without…
We provide a novel framework to compute a discrete vector potential of a given discrete vector field on arbitrary polyhedral meshes. The framework exploits the concept of acyclic matching, a combinatorial tool at the core of discrete Morse…
Topological structures such as the merge tree provide an abstract and succinct representation of scalar fields. They facilitate effective visualization and interactive exploration of feature-rich data. A merge tree captures the topology of…
We consider the inference of the structure of an undirected graphical model in an exact Bayesian framework. More specifically we aim at achieving the inference with close-form posteriors, avoiding any sampling step. This task would be…
Species tree estimation is a complex problem, due to the fact that different parts of the genome can have different evolutionary histories than the genome itself. One of the causes for this discord is incomplete lineage sorting (also called…
Joint distributions over many variables are frequently modeled by decomposing them into products of simpler, lower-dimensional conditional distributions, such as in sparsely connected Bayesian networks. However, automatically learning such…
We present Collaborative Trees, a novel tree model designed for regression prediction, along with its bagging version, which aims to analyze complex statistical associations between features and uncover potential patterns inherent in the…
Graph isomorphism, subgraph isomorphism, and maximum common subgraphs are classical well-investigated objects. Their (parameterized) complexity and efficiently tractable cases have been studied. In the present paper, for a given set of…
We consider the biased random walk on a tree constructed from the set of finite self-avoiding walks on a lattice, and use it to construct probability measures on infinite self-avoiding walks. The limit measure (if it exists) obtained when…
We compute magnitude homology of various graphs using algebraic Morse theory. Specifically, we (1) give an alternative proof that trees are diagonal, (2) identify a new class of diagonal graphs, (3) prove that the icosahedral graph is…
The purpose of this work is to develop a version of Forman's discrete Morse theory for simplicial complexes, based on internal strong collapses. Classical discrete Morse theory can be viewed as a generalization of Whitehead's collapses,…
Recent work has proven the existence of extreme inbreeding in a European ancestry sample taken from the contemporary UK population \cite{nature_01}. This result brings our attention again to a math problem related to inbreeding family trees…
A multiparameter filtration, or a multifiltration, may in many cases be seen as the collection of sublevel sets of a vector function, which we call a multifiltering function. The main objective of this paper is to obtain a better…
We study tree metrics that can be realized as a mixture of two star tree metrics. We prove that the only trees admitting such a decomposition are the ones coming from a tree with at most one internal edge, and whose weight satisfies certain…
We show that an algorithmic construction of sequences of recursive trees leads to a direct proof of the convergence of random recursive trees in an associated Doob-Martin compactification; it also gives a representation of the limit in…
In this note we consider ternary trees naturally embedded in the plane in a deterministic way such that the root has position zero, or in other words label zero, and the children of a node with position $j$ have positions $j-1$, $j$, and…
Trees or rooted trees have been generously studied in the literature. A forest is a set of trees or rooted trees. Here we give recurrence relations between the number of some kind of rooted forest with $k$ roots and that with $k+1$ roots on…