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Many modern parallel computing systems are heterogeneous at their node level. Such nodes may comprise general purpose CPUs and accelerators (such as, GPU, or Intel Xeon Phi) that provide high performance with suitable energy-consumption…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-04-19 Suejb Memeti , Lu Li , Sabri Pllana , Joanna Kolodziej , Christoph Kessler

Comprehending the performance bottlenecks at the core of the intricate hardware-software interactions exhibited by highly parallel programs on HPC clusters is crucial. This paper sheds light on the issue of automatically asynchronous MPI…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-09-06 Ayesha Afzal , Georg Hager , Stefano Markidis , Gerhard Wellein

Recently, there has been growing interest in using standard language constructs (e.g. C++'s Parallel Algorithms and Fortran's do concurrent) for accelerated computing as an alternative to directive-based APIs (e.g. OpenMP and OpenACC).…

Mathematical Software · Computer Science 2021-10-22 Miko M. Stulajter , Ronald M. Caplan , Jon A. Linker

VSIPL and OpenMP are two open standards for portable high performance computing. VSIPL delivers optimized single processor performance while OpenMP provides a low overhead mechanism for executing thread based parallelism on shared memory…

Astrophysics · Physics 2015-05-26 Jeremy Kepner

We discuss the use of both MPI and OpenMP in the teaching of senior undergraduate and junior graduate classes in parallel programming. We briefly introduce the OpenMP standard and discuss why we have chosen to use it in parallel programming…

Distributed, Parallel, and Cluster Computing · Computer Science 2007-05-23 Yi Pan

Hybrid MPI+threads programming is gaining prominence, but, in practice, applications perform slower with it compared to the MPI everywhere model. The most critical challenge to the parallel efficiency of MPI+threads applications is slow…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-06-30 Rohit Zambre , Aparna Chandramowlishwaran

Fortran's prominence in scientific computing requires strategies to ensure both that legacy codes are efficient on high-performance computing systems, and that the language remains attractive for the development of new high-performance…

Instrumentation and Methods for Astrophysics · Physics 2024-09-13 James McKevitt , Eduard I. Vorobyov , Igor Kulikov

Parallel jobs are different from sequential jobs and require a different type of process management. We present here a process management system for parallel programs such as those written using MPI. A primary goal of the system, which we…

Distributed, Parallel, and Cluster Computing · Computer Science 2007-05-23 Ralph Butler , William Gropp , Ewing Lusk

The paper demonstrates the optimization of the execution environment of a hybrid OpenMP+MPI computational fluid dynamics code (shallow water equation solver) on a cluster enabled with Intel Xeon Phi coprocessors. The discussion includes:…

Mathematical Software · Computer Science 2014-08-11 Andrey Vladimirov , Cliff Addison

With the increasing diversity of heterogeneous architecture in the HPC industry, porting a legacy application to run on different architectures is a tough challenge. In this paper, we present OpenMP Advisor, a first of its kind compiler…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-01-11 Alok Mishra , Abid M. Malik , Meifeng Lin , Barbara Chapman

With the appearance of the heterogeneous platform OpenPower,many-core accelerator devices have been coupled with Power host processors for the first time. Towards utilizing their full potential, it is worth investigating performance…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-11-07 Erik Zenker , René Widera , Axel Huebl , Guido Juckeland , Andreas Knüpfer , Wolfgang E. Nagel , Michael Bussmann

We use OpenMP to target hardware accelerators (GPUs) on Summit, a newly deployed supercomputer at the Oak Ridge Leadership Computing Facility (OLCF), demonstrating simplified access to GPU devices for users of our astrophysics code GenASiS…

Computational Physics · Physics 2019-09-09 Reuben D. Budiardja , Christian Y. Cardall

Asynchronous Many-task (AMT) runtime systems have gained increasing acceptance in the HPC community due to the performance improvements offered by fine-grained tasking runtime systems. At the same time, C++ standardization efforts are…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-07-09 Tianyi Zhang , Shahrzad Shirzad , Patrick Diehl , R. Tohid , Weile Wei , Hartmut Kaiser

Nowadays, several industrial applications are being ported to parallel architectures. These applications take advantage of the potential parallelism provided by multiple core processors. Many-core processors, especially the GPUs(Graphics…

Distributed, Parallel, and Cluster Computing · Computer Science 2011-03-28 Wendell Rodrigues , Frédéric Guyomarc'h , Jean-Luc Dekeyser

OpenCL for FPGA enables developers to design FPGAs using a programming model similar for processors. Recent works have shown that code optimization at the OpenCL level is important to achieve high computational efficiency. However, existing…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-02-06 Ji Liu , Abdullah-Al Kafi , Xipeng Shen , Huiyang Zhou

As HPC system architectures and the applications running on them continue to evolve, the MPI standard itself must evolve. The trend in current and future HPC systems toward powerful nodes with multiple CPU cores and multiple GPU…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-02-20 Hui Zhou , Ken Raffenetti , Yanfei Guo , Thomas Gillis , Robert Latham , Rajeev Thakur

GPU runtimes are historically implemented in CUDA or other vendor specific languages dedicated to GPU programming. In this work we show that OpenMP 5.1, with minor compiler extensions, is capable of replacing existing solutions without a…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-10-06 Shilei Tian , Jon Chesterfield , Johannes Doerfert , Barbara Chapman

Developing efficient parallel applications is critical to advancing scientific development but requires significant performance analysis and optimization. Performance analysis tools help developers manage the increasing complexity and scale…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-01-25 Onur Cankur , Aditya Tomar , Daniel Nichols , Connor Scully-Allison , Katherine E. Isaacs , Abhinav Bhatele

MatlabMPI is a Matlab implementation of the Message Passing Interface (MPI) standard and allows any Matlab program to exploit multiple processors. MatlabMPI currently implements the basic six functions that are the core of the MPI…

Astrophysics · Physics 2007-05-23 Jeremy Kepner

Scale-out parallel processing based on MPI is a 25-year-old standard with at least another decade of preceding history of enabling technologies in the High Performance Computing community. Newer frameworks such as MapReduce, Hadoop, and…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-07-18 Brandon L. Morris , Anthony Skjellum