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We introduce new methods for phylogenetic tree quartet construction by using machine learning to optimize the power of phylogenetic invariants. Phylogenetic invariants are polynomials in the joint probabilities which vanish under a model of…

Populations and Evolution · Quantitative Biology 2007-05-23 Nicholas Eriksson , Yuan Yao

The prevailing mindset is that a single decision tree underperforms classic random forests in testing accuracy, despite its advantages in interpretability and lightweight structure. This study challenges such a mindset by significantly…

Machine Learning · Computer Science 2024-11-27 Qiangqiang Mao , Yankai Cao

We present an algorithm for classification tasks on big data. Experiments conducted as part of this study indicate that the algorithm can be as accurate as ensemble methods such as random forests or gradient boosted trees. Unlike ensemble…

Machine Learning · Statistics 2017-10-27 Rajiv Sambasivan , Sourish Das

We propose a novel algorithm for optimizing multivariate linear threshold functions as split functions of decision trees to create improved Random Forest classifiers. Standard tree induction methods resort to sampling and exhaustive search…

Machine Learning · Computer Science 2015-06-26 Mohammad Norouzi , Maxwell D. Collins , David J. Fleet , Pushmeet Kohli

The main contribution of this paper is the development of a new decision tree algorithm. The proposed approach allows users to guide the algorithm through the data partitioning process. We believe this feature has many applications but in…

Machine Learning · Statistics 2020-10-27 Cédric Beaulac , Jeffrey S. Rosenthal

As one type of machine-learning model, a "decision-tree ensemble model" (DTEM) is represented by a set of decision trees. A DTEM is mainly known to be valid for structured data; however, like other machine-learning models, it is difficult…

Software Engineering · Computer Science 2020-05-25 Naoto Sato , Hironobu Kuruma , Yuichiroh Nakagawa , Hideto Ogawa

In this paper, Bayesian based aggregation of decision trees in an ensemble (decision forest) is investigated. The focus is laid on multi-class classification with number of samples significantly skewed toward one of the classes. The…

Machine Learning · Computer Science 2021-07-27 Jan Brabec , Lukas Machlica

The goal of branch length estimation in phylogenetic inference is to estimate the divergence time between a set of sequences based on compositional differences between them. A number of software is currently available facilitating branch…

Populations and Evolution · Quantitative Biology 2012-07-06 Ania Kedzierska , Marta Casanellas

Ensemble learning methods are designed to benefit from multiple learning algorithms for better predictive performance. The tradeoff of this improved performance is slower speed and larger size of ensemble learning systems compared to single…

Machine Learning · Computer Science 2021-01-22 Abolfazl Nadi , Hadi Moradi , Khalil Taheri

The interpretability of models has become a crucial issue in Machine Learning because of algorithmic decisions' growing impact on real-world applications. Tree ensemble methods, such as Random Forests or XgBoost, are powerful learning tools…

Optimization and Control · Mathematics 2024-01-19 Giulia Di Teodoro , Marta Monaci , Laura Palagi

We present a new tree boosting algorithm designed for the measurement of parameters in the context of effective field theory (EFT). To construct the algorithm, we interpret the optimized loss function of a traditional decision tree as the…

High Energy Physics - Phenomenology · Physics 2022-05-25 Suman Chatterjee , Nikolaus Frohner , Lukas Lechner , Robert Schöfbeck , Dennis Schwarz

Within machine learning, the supervised learning field aims at modeling the input-output relationship of a system, from past observations of its behavior. Decision trees characterize the input-output relationship through a series of nested…

Machine Learning · Statistics 2019-05-20 Arnaud Joly

Decision trees are a commonly used class of machine learning models valued for their interpretability and versatility, capable of both classification and regression. We propose ZTree, a novel decision tree learning framework that replaces…

Machine Learning · Computer Science 2025-09-17 Eric Cheng , Jie Cheng

Randomized experiments have been critical tools of decision making for decades. However, subjects can show significant heterogeneity in response to treatments in many important applications. Therefore it is not enough to simply know which…

Machine Learning · Computer Science 2017-09-13 Yan Zhao , Xiao Fang , David Simchi-Levi

We present an algorithm, called the Offset Tree, for learning to make decisions in situations where the payoff of only one choice is observed, rather than all choices. The algorithm reduces this setting to binary classification, allowing…

Machine Learning · Computer Science 2016-04-05 Alina Beygelzimer , John Langford

This paper describes experiments, on two domains, to investigate the effect of averaging over predictions of multiple decision trees, instead of using a single tree. Other authors have pointed out theoretical and commonsense reasons for…

Machine Learning · Computer Science 2013-04-10 Suk Wah Kwok , Chris Carter

Imagine being able to ask questions to a black box model such as "Which adversarial examples exist?", "Does a specific attribute have a disproportionate effect on the model's prediction?" or "What kind of predictions could possibly be made…

Machine Learning · Computer Science 2021-05-19 Laurens Devos , Wannes Meert , Jesse Davis

Behavior Trees constitute a widespread AI tool which has been successfully spun out in robotics. Their advantages include simplicity, modularity, and reusability of code. However, Behavior Trees remain a high-level decision making engine;…

Robotics · Computer Science 2020-09-01 Pilar de la Cruz , Justus Piater , Matteo Saveriano

We propose novel model transfer-learning methods that refine a decision forest model M learned within a "source" domain using a training set sampled from a "target" domain, assumed to be a variation of the source. We present two random…

Machine Learning · Computer Science 2018-05-01 Noam Segev , Maayan Harel , Shie Mannor , Koby Crammer , Ran El-Yaniv

Decision trees are popular machine learning models that are simple to build and easy to interpret. Even though algorithms to learn decision trees date back to almost 50 years, key properties affecting their generalization error are still…

Machine Learning · Computer Science 2020-10-16 Jean-Samuel Leboeuf , Frédéric LeBlanc , Mario Marchand