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We study the problem of experiment design to learn causal structures from interventional data. We consider an active learning setting in which the experimenter decides to intervene on one of the variables in the system in each step and uses…

Artificial Intelligence · Computer Science 2020-09-09 Amir Amirinezhad , Saber Salehkaleybar , Matin Hashemi

A novel information-theoretic method for reconstruction of interaction networks is introduced. We prove that the method is exact for some class of networks. Performance tests on large synthetic transcriptional regulatory networks produce…

Molecular Networks · Quantitative Biology 2007-05-23 Adam A. Margolin , Ilya Nemenman , Chris Wiggins , Gustavo Stolovitzky , Andrea Califano

Connectivity structure shapes neural computation, but inferring this structure from population recordings is degenerate: multiple connectivity structures can generate identical dynamics. Recent work uses low-rank recurrent neural networks…

Neurons and Cognition · Quantitative Biology 2026-03-30 Timothy Doyeon Kim , Ulises Pereira-Obilinovic , Yiliu Wang , Eric Shea-Brown , Uygar Sümbül

Dynamic mode decomposition has emerged as a leading technique to identify spatiotemporal coherent structures from high-dimensional data, benefiting from a strong connection to nonlinear dynamical systems via the Koopman operator. In this…

Systems and Control · Computer Science 2017-12-01 Zhe Bai , Eurika Kaiser , Joshua L. Proctor , J. Nathan Kutz , Steven L. Brunton

We revisit two popular convolutional neural networks (CNN) in person re-identification (re-ID), i.e, verification and classification models. The two models have their respective advantages and limitations due to different loss functions. In…

Computer Vision and Pattern Recognition · Computer Science 2018-04-04 Zhedong Zheng , Liang Zheng , Yi Yang

Sequence labeling is a widely used method for named entity recognition and information extraction from unstructured natural language data. In clinical domain one major application of sequence labeling involves extraction of medical entities…

Computation and Language · Computer Science 2016-08-03 Abhyuday Jagannatha , Hong Yu

The objective of this paper is to propose a framework, called Rough Clustering-based Consensus Community Detection (RC-CCD), to effectively address the challenge of identifying community structures in complex networks from a set of…

Artificial Intelligence · Computer Science 2025-05-29 Darian H. Grass-Boada , Leandro González-Montesino , Rubén Armañanzas

The success of graph embeddings or node representation learning in a variety of downstream tasks, such as node classification, link prediction, and recommendation systems, has led to their popularity in recent years. Representation learning…

Machine Learning · Computer Science 2018-09-07 Saba A. Al-Sayouri , Danai Koutra , Evangelos E. Papalexakis , Sarah S. Lam

This report reviews methods of pattern recognition and event reconstruction used in modern high energy physics experiments. After a brief introduction into general concepts of particle detectors and statistical evaluation, different…

Data Analysis, Statistics and Probability · Physics 2009-11-10 Rainer Mankel

TBecause of limited energy of nodes, an important issue for sensor network is efficient use of the energy. The clustering technique reduces energy consumption as cluster head sends sensed information to a sink node. Because of such…

Networking and Internet Architecture · Computer Science 2009-11-26 Boseung Kim , Joohyun Lee , Yongtae Shin

Measurements acquired from distributed physical systems are often sparse and noisy. Therefore, signal processing and system identification tools are required to mitigate noise effects and reconstruct unobserved dynamics from limited sensor…

Machine Learning · Computer Science 2025-09-08 Omid Sedehi , Manish Yadav , Merten Stender , Sebastian Oberst

This paper extends previous identification method to the asynchronous sampling scenario, enabling the simultaneous handling of asynchronous, non-uniform, and slow-rate sampling conditions. Moving beyond lumped systems, the proposed…

Systems and Control · Electrical Eng. & Systems 2026-02-05 Yunxiang Ma , Tong Zhou

Learning the structure of a network from time series data, in particular cyclostationary data, is of significant interest in many disciplines such as power grids, biology and finance. In this article, an algorithm is presented for…

Systems and Control · Computer Science 2019-09-20 Harish Doddi , Saurav Talukdar , Deepjyoti Deka , Murti Salapaka

Repeating patterns of spike sequences from a neuronal network have been proposed to be useful in the reconstruction of the network topology. Reverberations in a physiologically realistic model with various physical connection topologies…

Neurons and Cognition · Quantitative Biology 2014-07-15 Hao Song , Chun-Chung Chen , Jyh-Jang Sun , Pik-Yin Lai , C. K. Chan

The theory of compressed sensing (CS) has been successfully applied to image compression in the past few years, whose traditional iterative reconstruction algorithm is time-consuming. However, it has been reported deep learning-based CS…

Image and Video Processing · Electrical Eng. & Systems 2018-04-10 Yahan Wang , Huihui Bai , Lijun Zhao , Yao Zhao

Network-structured data becomes ubiquitous in daily life and is growing at a rapid pace. It presents great challenges to feature engineering due to the high non-linearity and sparsity of the data. The local and global structure of the…

Machine Learning · Computer Science 2025-01-31 Xin Sun , Zenghui Song , Yongbo Yu , Junyu Dong , Claudia Plant , Christian Boehm

Complex networks are an important paradigm of modern complex systems sciences which allows quantitatively assessing the structural properties of systems composed of different interacting entities. During the last years, intensive efforts…

Spatial ecological networks are widely used to model interactions between georeferenced biological entities (e.g., populations or communities). The analysis of such data often leads to a two-step approach where groups containing similar…

Applications · Statistics 2014-02-24 Vincent Miele , Franck Picard , Stéphane Dray

This paper discusses learning a structured feedback control to obtain sufficient robustness to exogenous inputs for linear dynamic systems with unknown state matrix. The structural constraint on the controller is necessary for many…

Systems and Control · Electrical Eng. & Systems 2021-02-23 Sayak Mukherjee , Thanh Long Vu

One of the ways to train deep neural networks effectively is to use residual connections. Residual connections can be classified as being either identity connections or bridge-connections with a reshaping convolution. Empirical observations…

Machine Learning · Computer Science 2019-02-19 Varshaneya V , Balasubramanian S , Darshan Gera