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We investigate the effect of cooperative interactions in an ensemble of microorganisms, modelled as self-propelled disk-like and rod-like particles, in a three-dimensional turbulent flow to show flocking as an emergent phenomenon. Building…

Soft Condensed Matter · Physics 2020-05-20 Anupam Gupta , Amal Roy , Arnab Saha , Samriddhi Sankar Ray

Internal phoretic flows due to the interactions of solid boundaries with local chemical gradients may be created using chemical patterning. Alternatively, we demonstrate here that internal flows might also be induced by geometric…

Fluid Dynamics · Physics 2016-10-19 Maciej Lisicki , Sebastien Michelin , Eric Lauga

Confined active nematics exhibit rich dynamical behavior, including spontaneous flows, periodic defect dynamics, and chaotic `active turbulence'. Here, we study these phenomena using the framework of Exact Coherent Structures, which has…

Soft Condensed Matter · Physics 2022-01-26 Caleb G. Wagner , Michael M. Norton , Jae Sung Park , Piyush Grover

The relevance of two-dimensional three-components (2D3C) flows goes well beyond their occurrence in nature, and a deeper understanding of their dynamics might be also helpful in order to shed further light on the dynamics of pure…

Fluid Dynamics · Physics 2017-11-23 L. Biferale , M. Buzzicotti , M. Linkmann

Active nematic fluids confined in narrow channels generate spontaneous flows when the activity is sufficiently intense. Recently, it was shown that if the molecular anchoring at the channel walls is conflicting flows are initiated even in…

Soft Condensed Matter · Physics 2021-11-02 C. Rorai , F. Toschi , I. Pagonabarraga

Fluid models that approximate kinetic effects have received attention recently in the modelling of large scale plasmas such as planetary magnetospheres. In three-dimensional reconnection, both reconnection itself and current sheet…

Plasma Physics · Physics 2021-03-03 F. Allmann-Rahn , S. Lautenbach , R. Grauer , R. D. Sydora

Turbulent flow evolution and energy cascades are significantly different in two-dimensional (2D) and three-dimensional (3D) flows. Studies have investigated these differences in obstacle-free turbulent flows, but solid boundaries have an…

Fluid Dynamics · Physics 2020-08-21 Bernat Font , Gabriel D. Weymouth , Vinh-Tan Nguyen , Owen R. Tutty

The discrete wavelet packet transform (DWPT) and discrete wavelet transform (DWT) are used to extract and study the dynamics of coherent structures in a turbulent rotating fluid. Three-dimensional (3D) turbulence is generated by strong…

Fluid Dynamics · Physics 2009-11-10 Jori E. Ruppert-Felsot , Olivier Praud , Eran Sharon , Harry L. Swinney

Active nematics contain topological defects which under sufficient activity move, create and annihilate in a chaotic quasi-steady state, called active turbulence. However, understanding active defects under confinement is an open challenge,…

Soft Condensed Matter · Physics 2019-10-02 Simon Čopar , Jure Aplinc , Žiga Kos , Slobodan Žumer , Miha Ravnik

We theoretically describe the dynamics of swimmer populations confined in thin liquid films. We first demonstrate that hydrodynamic interactions between confined swimmers only depend on their shape and are independent of their specific…

Soft Condensed Matter · Physics 2015-06-11 Tommaso Brotto , Jean-Baptiste Caussin , Eric Lauga , Denis Bartolo

Microfluidics involves the manipulation of flows at the microscale, typically requiring external power sources to generate pressure gradients. Alternatively, harnessing flows from active fluids, which are usually chaotic, has been proposed…

We simulate a hard-sphere liquid in confined geometry where the separation of the two parallel, hard walls is smaller than two particle diameters. By systematically reducing the wall separation we analyze the behavior of structural and…

Soft Condensed Matter · Physics 2022-08-18 Gerhard Jung , Thomas Franosch

We study how confinement transforms the chaotic dynamics of bulk microtubule-based active nematics into regular spatiotemporal patterns. For weak confinements, multiple continuously nucleating and annihilating topological defects…

Active polar fluids exhibit spontaneous flow when sufficient active stress is generated by internal molecular mechanisms. This is also referred to as an active Fr\'{e}edericksz transition. Experiments have revealed the existence of…

Soft Condensed Matter · Physics 2023-10-17 Abhinav Singh , Quentin Vagne , Frank Jülicher , Ivo F. Sbalzarini

The aim of the present work is to investigate the role of coherent structures in the generation of the secondary flow in a turbulent square duct. The coherent structures are defined as connected regions of flow where the product of the…

Fluid Dynamics · Physics 2019-06-04 Marco Atzori , Ricardo Vinuesa , Adrián Lozano-Durán , Philipp Schlatter

We investigate the collective dynamics of self-propelled droplets, confined in a one dimensional micro-fluidic channel. On one hand, neighboring droplets align and form large trains of droplets moving in the same direction. On the other…

Soft Condensed Matter · Physics 2020-05-14 Pierre Illien , Charlotte de Blois , Yang Liu , Marjolein N. van der Linden , Olivier Dauchot

The coherent vortical structures in turbulent flow through a strong 16:1 3-D contraction, are studied using time-resolved volumetric measurements. Visualization using vorticity magnitude criterion shows the emergence of long, stretched…

Using novel micro-printing techniques, we develop a versatile experimental setup that allows us to study how lateral confinement tames the active flows and defect properties of the microtubule/kinesin active nematic system. We demonstrate…

While studies of active nematics in two dimensions have shed light on various aspects of the flow regimes and topology of active matter, three-dimensional properties of topological defects and chaotic flows remain unexplored. By confining a…

Soft Condensed Matter · Physics 2018-07-18 Tyler N. Shendruk , Kristian Thijssen , Julia M. Yeomans , Amin Doostmohammadi

Many active fluid systems encountered in biology are set in total geometric confinement. Cytoplasmic streaming in plant cells is a prominent and ubiquitous example, in which cargo-carrying molecular motors move along polymer filaments and…

Soft Condensed Matter · Physics 2013-01-10 Francis G. Woodhouse , Raymond E. Goldstein