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In recent years, the data science community has pursued excellence and made significant research efforts to develop advanced analytics, focusing on solving technical problems at the expense of organizational and socio-technical challenges.…

Databases · Computer Science 2022-01-19 Iñigo Martinez , Elisabeth Viles , Igor G. Olaizola

Data science plays a critical role in biomedical research, but it requires professionals with expertise in coding and medical data analysis. Large language models (LLMs) have shown great potential in supporting medical tasks and performing…

Artificial Intelligence · Computer Science 2025-04-10 Zifeng Wang , Benjamin Danek , Ziwei Yang , Zheng Chen , Jimeng Sun

How should software engineering be adapted for Computational Science (CS)? If we understood that, then we could better support software sustainability, verifiability, reproducibility, comprehension, and usability for CS community. For…

Software Engineering · Computer Science 2020-03-13 Huy Tu , Rishabh Agrawal , Tim Menzies

Following code style conventions in software projects is essential for maintaining overall code quality. Adhering to these conventions improves maintainability, understandability, and extensibility. Additionally, following best practices…

Software Engineering · Computer Science 2026-01-16 Alvari Kupari , Nasser Giacaman , Valerio Terragni

Many data science students and practitioners don't see the value in making time to learn and adopt good coding practices as long as the code "works". However, code standards are an important part of modern data science practice, and they…

Computation · Statistics 2023-08-29 Randall Pruim , Maria-Cristiana Gîrjău , Nicholas J. Horton

In many academic disciplines, software is created during the research process or for a research purpose. The crucial role of software for research is increasingly acknowledged. The application of software engineering to research software…

Software Engineering · Computer Science 2025-12-02 Stephan Druskat , Lars Grunske

Data science has employed great research efforts in developing advanced analytics, improving data models and cultivating new algorithms. However, not many authors have come across the organizational and socio-technical challenges that arise…

Machine Learning · Computer Science 2022-01-17 Iñigo Martinez , Elisabeth Viles , Igor G. Olaizola

Data science is an integrated workflow of technical, analytical, communication, and ethical skills, but current AI benchmarks focus mostly on constituent parts. We test whether AI models can generate end-to-end data science projects. To do…

Other Statistics · Statistics 2026-02-17 Evelyn Hughes , Rohan Alexander

Context: Scientific open-source software (SciOSS) plays a foundational role in research and engineering, yet its long-term sustainability has often been overlooked and remains a significant concern. Objective: This study investigates the…

Software Engineering · Computer Science 2026-05-06 Sheikh Md. Mushfiqur Rahman , Gregory R. Watson , Nasir U. Eisty

Scientific software is essential to scientific innovation and in many ways it is distinct from other types of software. Abandoned (or unmaintained), buggy, and hard to use software, a perception often associated with scientific software can…

Software Engineering · Computer Science 2025-06-23 Addi Malviya Thakur , Reed Milewicz , Mahmoud Jahanshahi , Lavínia Paganini , Bogdan Vasilescu , Audris Mockus

Scientific software-defined as computer programs, scripts, or code used in scientific research, data analysis, modeling, or simulation-has become central to modern research. However, there is limited research on the readability and…

Software Engineering · Computer Science 2025-01-20 Alyssia Chen , Carol Wong , Bonita Sharif , Anthony Peruma

A large number of computational scientific research projects make use of open source software packages. However, the development process of such tools frequently differs from conventional software development; partly because of the nature…

Software Engineering · Computer Science 2013-09-24 Ivan Girotto , Axel Kohlmeyer , David Grellscheid , Shawn T. Brown

Code search is a core software engineering task. Effective code search tools can help developers substantially improve their software development efficiency and effectiveness. In recent years, many code search studies have leveraged…

Software Engineering · Computer Science 2021-10-12 Chao Liu , Xin Xia , David Lo , Cuiyun Gao , Xiaohu Yang , John Grundy

Academic software development practices often differ from those of commercial development settings, yet only limited research has been conducted on assessing software development practises in academia. Here we present a case study of…

Software Engineering · Computer Science 2015-06-18 Derek Groen , Xiaohu Guo , James A. Grogan , Ulf D. Schiller , James M. Osborne

We introduce DS-1000, a code generation benchmark with a thousand data science problems spanning seven Python libraries, such as NumPy and Pandas. Compared to prior works, DS-1000 incorporates three core features. First, our problems…

Software Engineering · Computer Science 2022-11-22 Yuhang Lai , Chengxi Li , Yiming Wang , Tianyi Zhang , Ruiqi Zhong , Luke Zettlemoyer , Scott Wen-tau Yih , Daniel Fried , Sida Wang , Tao Yu

Context: Scientific software plays an important role in critical decision making, for example making weather predictions based on climate models, and computation of evidence for research publications. Recently, scientists have had to…

Software Engineering · Computer Science 2018-04-06 Upulee Kanewala , James M. Bieman

Open Source Software for Social Good (OSS4SG) projects aim to address critical societal challenges, such as healthcare access and community safety. Understanding the community dynamics and contributor patterns in these projects is essential…

Software Engineering · Computer Science 2026-02-12 Mohamed Ouf , Shayan Noei , Zeph Van Iterson , Mariam Guizani , Ying Zou

Software development has become essential to scientific research, but its relationship to traditional metrics of scholarly credit remains poorly understood. We develop a dataset of approximately 140,000 paired research articles and code…

Software Engineering · Computer Science 2026-01-08 Eva Maxfield Brown , Isaac Slaughter , Nicholas Weber

Context: Contemporary software development organizations lack diversity and the ratios of women in Free and open-source software (FOSS) communities are even lower than the industry average. Although the results of recent studies hint the…

Software Engineering · Computer Science 2023-02-09 Sayma Sultana , Asif Kamal Turzo , Amiangshu Bosu

This paper studies the problem of predicting the coding effort for a subsequent year of development by analysing metrics extracted from project repositories, with an emphasis on projects containing XML code. The study considers thirteen…

Software Engineering · Computer Science 2015-03-17 Siim Karus , Marlon Dumas
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