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Mathematical models of SARS-CoV-2 spread are used for guiding the design of mitigation steps aimed at containing and decelerating the contagion, and at identifying impending breaches of health care system surge capacity. The challenges of…

Populations and Evolution · Quantitative Biology 2020-06-17 Daniela Calvetti , Alexander Hoover , Johnie Rose , Erkki Somersalo

The estimate of the remaining time of an ongoing wave of epidemic spreading is a critical issue. Due to the variations of a wide range of parameters in an epidemic, for simple models such as Susceptible-Infected-Removed (SIR) model, it is…

Populations and Evolution · Quantitative Biology 2021-10-12 Anvesh Reddy , Hanesh Koganti , Sai Krishna , Suhas Reddy , Soumyajyoti Biswas

An analytical study of the disease COVID-19 in Colombia was carried out using mathematical models such as Susceptible-Exposed-Infectious-Removed (SEIR), Logistic Regression (LR), and a machine learning method called Polynomial Regression…

Containment of epidemic outbreaks entails great societal and economic costs. Cost-effective containment strategies rely on efficiently identifying infected individuals, making the best possible use of the available testing resources.…

Populations and Evolution · Quantitative Biology 2020-12-01 Laura Natali , Saga Helgadottir , Onofrio M. Marago , Giovanni Volpe

Due to the epidemic of the coronavirus (Covid-19) and its rapid spread around the world, the world has faced an enormous crisis. To prevent the spread of the coronavirus, the World Health Organization (WHO) has introduced the use of masks…

Computer Vision and Pattern Recognition · Computer Science 2023-10-31 Abolfazl Younesi , Reza Afrouzian , Yousef Seyfari

We examine the age-structured SIR model, a variant of the classical Susceptible-Infected-Recovered (SIR) model of epidemic propagation, in the context of COVID-19. In doing so, we provide a theoretical basis for the model, perform an…

Optimization and Control · Mathematics 2022-03-11 Rohit Parasnis , Ryosuke Kato , Amol Sakhale , Massimo Franceschetti , Behrouz Touri

The Corona Virus Disease 2019 (COVID-19) belongs to human coronaviruses (HCoVs), which spreads rapidly around the world. Compared with new drug development, drug repurposing may be the best shortcut for treating COVID-19. Therefore, we…

Machine Learning · Computer Science 2021-07-21 Shuting Jin , Xiangxiang Zeng , Wei Huang , Feng Xia , Changzhi Jiang , Xiangrong Liu , Shaoliang Peng

In this work, we aim to understand the influence of the heterogeneity of infection rates on the Susceptible-Infected-Susceptible (SIS) epidemic spreading. Employing the classic SIS model as the benchmark, we study the influence of the…

Physics and Society · Physics 2016-04-06 Bo Qu , Huijuan Wang

The transmission dynamics of an epidemic are rarely homogeneous. Super-spreading events and super-spreading individuals are two types of heterogeneous transmissibility. Inference of super-spreading is commonly carried out on secondary case…

Quantitative Methods · Quantitative Biology 2025-01-23 Hannah Craddock , Simon EF Spencer , Xavier Didelot

Computed Tomography (CT) scans provide a detailed image of the lungs, allowing clinicians to observe the extent of damage caused by COVID-19. The CT severity score (CTSS) based scoring method is used to identify the extent of lung…

Image and Video Processing · Electrical Eng. & Systems 2023-03-20 Anand Thyagachandran , Hema A Murthy

We study the problem of identifying a single infection source in a network under the susceptible-infected-recovered-infected (SIRI) model. We describe the infection model via a state-space model, and utilizing a state propagation approach,…

Physics and Society · Physics 2015-02-13 Wuhua Hu , Wee Peng Tay , Athul Harilal , Gaoxi Xiao

We consider the SEIRS compartment epidemiology model suitable for predicting the evolution of the COVID-19 pandemy in the extreme limiting case of no acquired immunity. The disease-free and endemic fixed points are found and their stability…

Populations and Evolution · Quantitative Biology 2020-12-15 J. M. Ilnytskyi

The recent pandemic has underscored the importance of accurately diagnosing COVID-19 in hospital settings. A major challenge in this regard is differentiating COVID-19 from other respiratory illnesses based on chest X-rays, compounded by…

Image and Video Processing · Electrical Eng. & Systems 2024-01-24 Rittika Adhikari , Christopher Settles

Effective property prediction methods can help accelerate the search for COVID-19 antivirals either through accurate in-silico screens or by effectively guiding on-going at-scale experimental efforts. However, existing prediction tools have…

Quantitative Methods · Quantitative Biology 2020-05-08 Wengong Jin , Regina Barzilay , Tommi Jaakkola

COVID-19 has shown a relatively low mortality rate in young healthy individuals, with the majority of this group being asymptomatic or having mild symptoms, while the severity of the disease among individuals with underlying health…

Physics and Society · Physics 2020-06-22 Dario Ortega Anderez , Eiman Kanjo , Ganna Pogrebna , Shane Johnson , John Alan Hunt

Throughout the course of an epidemic, the rate at which disease spreads varies with behavioral changes, the emergence of new disease variants, and the introduction of mitigation policies. Estimating such changes in transmission rates can…

Methodology · Statistics 2022-11-29 Jenny Huang , Raphaël Morsomme , David Dunson , Jason Xu

The COVID-19 pandemic has presented unprecedented challenges worldwide, with its impact varying significantly across different geographic and socioeconomic contexts. This study employs a clustering analysis to examine the diversity of…

Computational Engineering, Finance, and Science · Computer Science 2024-08-06 Morteza Maleki

The spread of COVID-19 during the initial phase of the first half of 2020 was curtailed to a larger or lesser extent through measures of social distancing imposed by most countries. In this work, we link directly, through machine learning…

Populations and Evolution · Quantitative Biology 2020-08-20 G. D. Barmparis , G. P. Tsironis

We construct an SIR-type model for COVID-19, incorporating as a parameter the susceptible individuals' cautiousness level. We determine the model's basic reproduction number, study the stability of the equilibria analytically, and perform a…

Dynamical Systems · Mathematics 2022-04-06 Benny Yong , Livia Owen , Jonathan Hoseana

Human behavior plays a critical role in shaping epidemic trajectories. During health crises, people respond in diverse ways in terms of self-protection and adherence to recommended measures, largely reflecting differences in how individuals…

Physics and Society · Physics 2026-01-30 Fabio Mazza , Gabriele Ricci , Francesca Colaiori , Stefano Guarino , Sandro Meloni , Fabio Saracco
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