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The present paper introduces a data-driven framework for describing the time-varying nature of an SIRD model in the context of COVID-19. By embedding a rolling regression in a mixed integer bilevel nonlinear programming problem, our aim is…

Populations and Evolution · Quantitative Biology 2021-03-04 Javier Rubio-Herrero , Yuchen Wang

We study the spatial heterogeneity effect on regional COVID-19 pandemic timing and severity by analyzing the COVID-19 growth rate curves in the United States. We propose a geographically detailed functional data grouping method equipped…

Applications · Statistics 2020-08-24 Tianyu Pan , Weining Shen , Guanyu Hu

Understanding the spatio-temporal patterns of the coronavirus disease 2019 (COVID-19) is essential to construct public health interventions. Spatially referenced data can provide richer opportunities to understand the mechanism of the…

Methodology · Statistics 2022-07-15 Jaewoo Park , Seorim Yi , Won Chang , Jorge Mateu

By characterising the time evolution of COVID-19 in term of its "velocity" (log of the new cases per day) and its rate of variation, or "acceleration", we show that in many countries there has been a deceleration even before lockdowns were…

Populations and Evolution · Quantitative Biology 2020-12-29 Giacomo Barzon , Karan Kabbur Hanumanthappa Manjunatha , Wolfgang Rugel , Enzo Orlandini , Marco Baiesi

We present three data driven model-types for COVID-19 with a minimal number of parameters to provide insights into the spread of the disease that may be used for developing policy responses. The first is exponential growth, widely studied…

Populations and Evolution · Quantitative Biology 2022-05-25 Andrea L. Bertozzi , Elisa Franco , George Mohler , Martin B. Short , Daniel Sledge

The outbreaks of Coronavirus Disease 2019 (COVID-19) have impacted the world significantly. Modeling the trend of infection and real-time forecasting of cases can help decision making and control of the disease spread. However, data-driven…

Populations and Evolution · Quantitative Biology 2020-09-18 Zhijian Li , Yunling Zheng , Jack Xin , Guofa Zhou

Patients with the COVID-19 infection may have pneumonia-like symptoms as well as respiratory problems which may harm the lungs. From medical images, coronavirus illness may be accurately identified and predicted using a variety of machine…

Computer Vision and Pattern Recognition · Computer Science 2023-02-20 Tareque Rahman Ornob , Gourab Roy , Enamul Hassan

The adoption of prophylaxis attitudes, such as social isolation and use of face masks, to mitigate epidemic outbreaks strongly depends on the support of the population. In this work, we investigate a susceptible-infected-recovered (SIR)…

Physics and Society · Physics 2022-10-05 Diogo H. Silva , Celia Anteneodo , Silvio C. Ferreira

We propose two stochastic models for the Coronavirus pandemic. The statistical properties of the models, in particular the correlation functions and the probability density function, have duly been computed. Our models, which generalises a…

Medical Physics · Physics 2020-12-04 Giorgio Sonnino , Fernando Mora , Pasquale Nardone

In this article, we consider a dynamic epidemiology model for the spread of the COVID-19 infection. Starting from the classical SEIR model, the model is modified so as to better describe characteristic features of the underlying pathogen…

Populations and Evolution · Quantitative Biology 2020-05-22 Daniela Calvetti , Alexander Hoover , Johnie Rose , Erkki Somersalo

Highly-interconnected societies difficult to model the spread of infectious diseases such as COVID-19. Single-region SIR models fail to account for incoming forces of infection and expanding them to a large number of interacting regions…

Machine Learning · Computer Science 2023-11-06 Adrian Rojas-Campos , Lukas Stelz , Pascal Nieters

The purpose of this work is to give a contribution to the understanding of the COVID-19 contagion in Italy. To this end, we developed a modified Susceptible-Infected-Recovered (SIR) model for the contagion, and we used official data of the…

Physics and Society · Physics 2020-04-01 Giuseppe C. Calafiore , Carlo Novara , Corrado Possieri

The outbreak and propagation of COVID-19 have posed a considerable challenge to modern society. In particular, the different restrictive actions taken by governments to prevent the spread of the virus have changed the way humans interact…

Populations and Evolution · Quantitative Biology 2021-10-05 Sebastian Contreras , H. Andres Villavicencio , David Medina-Ortiz , Juan Pablo Biron-Lattes , Alvaro Olivera-Nappa

Most COVID-19 predictive modeling efforts use statistical or mathematical models to predict national- and state-level COVID-19 cases or deaths in the future. These approaches assume parameters such as reproduction time, test positivity…

The correct evaluation of the reproductive number $R$ for COVID-19 -- which characterizes the average number of secondary cases generated by each typical primary case -- is central in the quantification of the potential scope of the…

Applications · Statistics 2021-04-15 Claire Donnat , Susan Holmes

In the last few months, the novel COVID19 pandemic has spread all over the world. Due to its easy transmission, developing techniques to accurately and easily identify the presence of COVID19 and distinguish it from other forms of flu and…

Image and Video Processing · Electrical Eng. & Systems 2020-04-01 Muhammad Farooq , Abdul Hafeez

Motivated by the need for novel robust approaches to modelling the Covid-19 epidemic, this paper treats a population of $N$ individuals as an inhomogeneous random social network (IRSN). The nodes of the network represent different types of…

Populations and Evolution · Quantitative Biology 2020-09-23 T. R. Hurd

This paper presents a federated learning (FL) approach to train an AI model for SARS-Cov-2 variant classification. We analyze the SARS-CoV-2 spike sequences in a distributed way, without data sharing, to detect different variants of this…

Machine Learning · Computer Science 2023-11-10 Prakash Chourasia , Taslim Murad , Zahra Tayebi , Sarwan Ali , Imdad Ullah Khan , Murray Patterson

A plethora of prediction models of SARS-CoV-2 pandemic were proposed in the past. Prediction performances not only depend on the structure and features of the model, but also on its parametrization. Official databases are often biased due…

Populations and Evolution · Quantitative Biology 2021-09-27 Yuri Kheifetz , Holger Kirsten , Markus Scholz

SARS-CoV2, which causes coronavirus disease (COVID-19) is continuing to spread globally and has become a pandemic. People have lost their lives due to the virus and the lack of counter measures in place. Given the increasing caseload and…