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In randomly connected networks of pulse-coupled elements a time-dependent input signal can be buffered over a short time. We studied the signal buffering properties in simulated networks as a function of the networks state, characterized by…

Neurons and Cognition · Quantitative Biology 2009-11-11 Julien Mayor , Wulfram Gerstner

The connectome, a map of the structural and/or functional connections in the brain, provides a complex representation of the neurobiological phenotypes on which it supervenes. This information-rich data modality has the potential to…

Network models have been widely used to study diverse systems and analyze their dynamic behaviors. Given the structural variability of networks, an intriguing question arises: Can we infer the type of system represented by a network based…

Social and Information Networks · Computer Science 2025-05-29 Gonzalo Travieso , Joao Merenda , Odemir M. Bruno

Claiming causal inferences in network settings necessitates careful consideration of the often complex dependency between outcomes for actors. Of particular importance are treatment spillover or outcome interference effects. We consider…

Methodology · Statistics 2022-07-18 Duncan A. Clark , Mark S. Handcock

We apply an information theoretic treatment of action potential time series measured with microelectrode arrays to estimate the connectivity of mammalian neuronal cell assemblies grown {\it in vitro}. We infer connectivity between two…

Neurons and Cognition · Quantitative Biology 2007-05-23 Luis M. A. Bettencourt , Greg J. Stephens , Michael I. Ham , Guenter W. Gross

Large-scale white matter pathways crisscrossing the cortex create a complex pattern of connectivity that underlies human cognitive function. Generative mechanisms for this architecture have been difficult to identify in part because little…

Neurons and Cognition · Quantitative Biology 2015-06-16 Florian Klimm , Danielle S. Bassett , Jean M. Carlson , Peter J. Mucha

Network classification has a variety of applications, such as detecting communities within networks and finding similarities between those representing different aspects of the real world. However, most existing work in this area focus on…

Social and Information Networks · Computer Science 2018-08-08 Kun Tu , Jian Li , Don Towsley , Dave Braines , Liam D. Turner

Interactions between elements, which are usually represented by networks, have to delineate potentially unequal relationships in terms of their relative importance or direction. The intrinsic unequal relationships of such kind, however, are…

Physics and Society · Physics 2021-12-01 Mi Jin Lee , Eun Lee , Byunghwee Lee , Hawoong Jeong , Deok-Sun Lee , Sang Hoon Lee

Network inference approaches are now widely used in biological applications to probe regulatory relationships between molecular components such as genes or proteins. Many methods have been proposed for this setting, but the connections and…

Applications · Statistics 2014-06-03 Chris. J. Oates , Sach Mukherjee

Networks are fundamental to the study of complex systems, ranging from social contacts, message transactions, to biological regulations and economical networks. In many realistic applications, these networks may vary over time. Modeling and…

Social and Information Networks · Computer Science 2020-04-07 Kun Tu , Jian Li , Don Towsley , Dave Braines , Liam Turner

Inferring networks from observed time series data presents a clear glimpse into the interconnections among nodes. Network inference models, when dealing with real-world open cases, especially in the presence of observational noise,…

Social and Information Networks · Computer Science 2024-05-07 Kai Wu , Yuanyuan Li , Jing Liu

Naturally occurring networks exhibit quantitative features revealing underlying growth mechanisms. Numerous network mechanisms have recently been proposed to reproduce specific properties such as degree distributions or clustering…

Quantitative Methods · Quantitative Biology 2009-11-10 Manuel Middendorf , Etay Ziv , Chris Wiggins

In many data sets, crucial elements co-exist with non-essential ones and noise. For data represented as networks in particular, several methods have been proposed to extract a "network backbone", i.e., the set of most important links.…

Physics and Society · Physics 2021-05-07 Charley Presigny , Petter Holme , Alain Barrat

This work presents a novel means for understanding learning dynamics and scaling relations in neural networks. We show that certain measures on the spectrum of the empirical neural tangent kernel, specifically entropy and trace, yield…

Machine Learning · Computer Science 2024-10-11 Samuel Tovey , Sven Krippendorf , Michael Spannowsky , Konstantin Nikolaou , Christian Holm

Machine learning algorithms are designed to capture complex relationships between features. In this context, the high dimensionality of data often results in poor model performance, with the risk of overfitting. Feature selection, the…

Machine Learning · Computer Science 2023-10-18 Paolo Bonetti , Alberto Maria Metelli , Marcello Restelli

Temporal networks are widely used models for describing the architecture of complex systems. Network memory -- that is the dependence of a temporal network's structure on its past -- has been shown to play a prominent role in diffusion,…

Physics and Society · Physics 2020-04-28 Oliver E. Williams , Lucas Lacasa , Ana P. Millán , Vito Latora

Networks describe a variety of interacting complex systems in social science, biology and information technology. Usually the nodes of real networks are identified not only by their connections but also by some other characteristics.…

Physics and Society · Physics 2015-05-13 Ginestra Bianconi , Paolo Pin , Matteo Marsili

This work explores hypernetworks: an approach of using a one network, also known as a hypernetwork, to generate the weights for another network. Hypernetworks provide an abstraction that is similar to what is found in nature: the…

Machine Learning · Computer Science 2016-12-02 David Ha , Andrew Dai , Quoc V. Le

There is nowadays a constant flux of data being generated and collected in all types of real world systems. These data sets are often indexed by time, space or both requiring appropriate approaches to analyze the data. In univariate…

Social and Information Networks · Computer Science 2021-10-20 Vanessa Freitas Silva , Maria Eduarda Silva , Pedro Ribeiro , Fernando Silva

We consider the problem of identifying the topology of a weighted, undirected network $\mathcal G$ from observing snapshots of multiple independent consensus dynamics. Specifically, we observe the opinion profiles of a group of agents for a…

Social and Information Networks · Computer Science 2019-02-12 Santiago Segarra , Michael T. Schaub , Ali Jadbabaie