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When working with large biological data sets, exploratory analysis is an important first step for understanding the latent structure and for generating hypotheses to be tested in subsequent analyses. However, when the number of variables is…

Methodology · Statistics 2017-02-03 Julia Fukuyama

Supervised fine-tuning is the most common method to adapt large language models (LLMs) to downstream tasks, but full fine-tuning LLMs requires massive computational resources. Recently, parameter-efficient fine-tuning (PEFT) methods have…

Computation and Language · Computer Science 2024-02-27 Xiangdi Meng , Damai Dai , Weiyao Luo , Zhe Yang , Shaoxiang Wu , Xiaochen Wang , Peiyi Wang , Qingxiu Dong , Liang Chen , Zhifang Sui

Complexity is often exhibited in dynamical systems, where certain parameters evolve with time in a strange and chaotic nature. These systems lack predictability and are common in the physical world. Dissipative systems are one of such…

Dimensionality reduction (DR) algorithms compress high-dimensional data into a lower dimensional representation while preserving important features of the data. DR is a critical step in many analysis pipelines as it enables visualisation,…

Machine Learning · Statistics 2023-05-26 Aditya Ravuri , Francisco Vargas , Vidhi Lalchand , Neil D. Lawrence

High dimensional data and systems with many degrees of freedom are often characterized by covariance matrices. In this paper, we consider the problem of simultaneously estimating the dimension of the principal (dominant) subspace of these…

Numerical Analysis · Computer Science 2018-10-10 Shashanka Ubaru , Abd-Krim Seghouane , Yousef Saad

We present a new straightforward principal component analysis (PCA) method based on the diagonalization of the weighted variance-covariance matrix through two spectral decomposition methods: power iteration and Rayleigh quotient iteration.…

Instrumentation and Methods for Astrophysics · Physics 2014-12-16 Ludovic Delchambre

Principal component analysis (PCA) is one of the most widely used dimensionality reduction methods in scientific data analysis. In many applications, for additional interpretability, it is desirable for the factor loadings to be sparse,…

Optimization and Control · Mathematics 2017-12-05 Santanu S. Dey , Rahul Mazumder , Marco Molinaro , Guanyi Wang

In human-level NLP tasks, such as predicting mental health, personality, or demographics, the number of observations is often smaller than the standard 768+ hidden state sizes of each layer within modern transformer-based language models,…

Computation and Language · Computer Science 2023-06-05 Adithya V Ganesan , Matthew Matero , Aravind Reddy Ravula , Huy Vu , H. Andrew Schwartz

Prediction of poly(lactic co glycolic acid) (PLGA) micro- and nanoparticles' dissolution rates plays a significant role in pharmaceutical and medical industries. The prediction of PLGA dissolution rate is crucial for drug manufacturing.…

Quantitative Methods · Quantitative Biology 2017-05-22 Varun Kumar Ojha , Konrad Jackowski , Ajith Abraham , Václav Snášel

Principal component analysis (PCA) has been widely applied to dimensionality reduction and data pre-processing for different applications in engineering, biology and social science. Classical PCA and its variants seek for linear projections…

Machine Learning · Computer Science 2017-07-11 Xiaojun Chang , Feiping Nie , Yi Yang , Heng Huang

The scalability of statistical estimators is of increasing importance in modern applications. One approach to implementing scalable algorithms is to compress data into a low dimensional latent space using dimension reduction methods. In…

Machine Learning · Statistics 2015-04-14 Gregory Darnell , Stoyan Georgiev , Sayan Mukherjee , Barbara E Engelhardt

Principal components analysis (PCA) is a classical method for the reduction of dimensionality of data in the form of n observations (or cases) of a vector with p variables. For a simple model of factor analysis type, it is proved that…

Statistics Theory · Mathematics 2009-01-29 Iain M Johnstone , Arthur Yu Lu

Real-world data is frequently noisy and ambiguous. In crowdsourcing, for example, human annotators may assign conflicting class labels to the same instances. Partial-label learning (PLL) addresses this challenge by training classifiers when…

Machine Learning · Computer Science 2026-01-12 Tobias Fuchs , Nadja Klein

Estimating intrinsic dimensionality of data is a classic problem in pattern recognition and statistics. Principal Component Analysis (PCA) is a powerful tool in discovering dimensionality of data sets with a linear structure; it, however,…

Computer Vision and Pattern Recognition · Computer Science 2010-02-11 Mingyu Fan , Nannan Gu , Hong Qiao , Bo Zhang

In this paper, we develop new statistical theory for probabilistic principal component analysis models in high dimensions. The focus is the estimation of the noise variance, which is an important and unresolved issue when the number of…

Statistics Theory · Mathematics 2014-06-23 Damien Passemier , Zhaoyuan Li , Jian-Feng Yao

We propose a modified, high-dimensional version of a recent dimension estimation procedure that determines the dimension via the introduction of augmented noise variables into the data. Our asymptotic results show that the proposal is…

Statistics Theory · Mathematics 2025-02-07 Una Radojicic , Joni Virta

Given a sample covariance matrix, we examine the problem of maximizing the variance explained by a linear combination of the input variables while constraining the number of nonzero coefficients in this combination. This is known as sparse…

Optimization and Control · Mathematics 2010-12-24 Youwei Zhang , Alexandre d'Aspremont , Laurent El Ghaoui

In datasets where the number of parameters is fixed and the number of samples is large, principal component analysis (PCA) is a powerful dimension reduction tool. However, in many contemporary datasets, when the number of parameters is…

Probability · Mathematics 2019-02-14 Enrico Au-Yeung , Greg Zanotti

This paper proposes a generalized framework for domain adaptation of Probabilistic Linear Discriminant Analysis (PLDA) in speaker recognition. It not only includes several existing supervised and unsupervised domain adaptation methods but…

Audio and Speech Processing · Electrical Eng. & Systems 2020-08-21 Qiongqiong Wang , Koji Okabe , Kong Aik Lee , Takafumi Koshinaka

Functional data analysis (FDA) methods have computational and theoretical appeals for some high dimensional data, but lack the scalability to modern large sample datasets. To tackle the challenge, we develop randomized algorithms for two…

Computation · Statistics 2022-04-11 Shiyuan He , Xiaomeng Yan