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SARS-CoV-2 started propagating worldwide in January 2020 and has now reached virtually all communities on the planet. This short review provides evidence of this spread and documents modelling efforts undertaken to understand and forecast…

Populations and Evolution · Quantitative Biology 2025-05-26 Julien Arino

In recent months the world has been surprised by the rapid advance of COVID-19. In order to face this disease and minimize its socio-economic impacts, in addition to surveillance and treatment, diagnosis is a crucial procedure. However, the…

Image and Video Processing · Electrical Eng. & Systems 2020-07-13 Lucas P. Soares , Cesar P. Soares

COVID-19 pandemic continues to spread rapidly over the world and causes a tremendous crisis in global human health and the economy. Its early detection and diagnosis are crucial for controlling the further spread. Many deep learning-based…

Image and Video Processing · Electrical Eng. & Systems 2022-12-21 Yujia Xu , Hak-Keung Lam , Guangyu Jia , Jian Jiang , Junkai Liao , Xinqi Bao

The COVID-19 pandemic continues to severely undermine the prosperity of the global health system. To combat this pandemic, effective screening techniques for infected patients are indispensable. There is no doubt that the use of chest X-ray…

Image and Video Processing · Electrical Eng. & Systems 2020-10-01 Nihad Karim Chowdhury , Md. Muhtadir Rahman , Muhammad Ashad Kabir

The widely used gene quantisation technique, Lateral Flow Device (LFD), is now commonly used to detect the presence of SARS-CoV-2. It is enabling the control and prevention of the spread of the virus. Depending on the viral load, LFD have…

Machine Learning · Computer Science 2022-05-27 Neeraj Vashistha

COVID-19 pandemic is an ongoing global pandemic which has caused unprecedented disruptions in the public health sector and global economy. The virus, SARS-CoV-2 is responsible for the rapid transmission of coronavirus disease. Due to its…

The coronavirus (COVID-19) is currently the most common contagious disease which is prevalent all over the world. The main challenge of this disease is the primary diagnosis to prevent secondary infections and its spread from one person to…

Background: During 2021 several new variants of the SARS-CoV-2 virus appeared with both increased levels of transmissibility and virulence with respect to the original wild variant. The Delta (B.1.617.2) variation, first seen in India,…

Physics and Society · Physics 2021-08-17 William A. Barletta

Summary: The CoV-Spectrum website supports the identification of new SARS-CoV-2 variants of concern and the tracking of known variants. Its flexible amino acid and nucleotide mutation search allows querying of variants before they are…

Populations and Evolution · Quantitative Biology 2021-12-28 Chaoran Chen , Sarah Nadeau , Michael Yared , Philippe Voinov , Ning Xie , Cornelius Roemer , Tanja Stadler

Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), a novel virus of beta coronavirus genus originated in Wuhan, China in December 2019, resulted in the pandemic spread of Corona Virus Disease 2019 (COVID-19) worldwide. This genus…

Tissues and Organs · Quantitative Biology 2020-06-17 Mohammed A. El-Magd

The discovery of SARS-CoV-2, the responsible virus for the Covid-19 epidemic, has sparked a global health concern with many countries affected. Developing models that can interpret the epidemic and give common trend parameters are useful…

Populations and Evolution · Quantitative Biology 2021-09-21 Milad Radiom , Jean-Franccois Berret

Diagnosis of COVID-19 is necessary to prevent and control the disease. Deep learning methods have been considered a fast and accurate method. In this paper, by the parallel combination of three well-known pre-trained networks, we attempted…

Image and Video Processing · Electrical Eng. & Systems 2022-08-17 Faezeh Amouzegar , Hamid Mirvaziri , Mostafa Ghazizadeh-Ahsaee , Mahdi Shariatzadeh

Recently, the outbreak of the novel Coronavirus disease 2019 (COVID-19) pandemic has seriously endangered human health and life. Due to limited availability of test kits, the need for auxiliary diagnostic approach has increased. Recent…

Image and Video Processing · Electrical Eng. & Systems 2021-09-07 Xiao Qi , Lloyd Brown , David J. Foran , Ilker Hacihaliloglu

Originating in Wuhan, the novel coronavirus, severe acute respiratory syndrome 2 (SARS-CoV-2), has astonished health-care systems across globe due to its rapid and simultaneous spread to the neighboring and distantly located countries. To…

Populations and Evolution · Quantitative Biology 2020-06-30 Vikram Singh , Vikram Singh

Coronaviruses have recently caused world-wide severe outbreaks: SARS (Severe Acute Respiratory Syndrome) in 2002 and MERS (Middle-East Respiratory Syndrome) in 2012. At the end of 2019, a new coronavirus outbreak appeared in Wuhan (China)…

Genomics · Quantitative Biology 2020-04-03 Miguel Ramos Pascual

The outbreak of the coronavirus disease 2019 (COVID-19) has now spread throughout the globe infecting over 150 million people and causing the death of over 3.2 million people. Thus, there is an urgent need to study the dynamics of…

Amidst the ongoing pandemic, several studies have shown that COVID-19 classification and grading using computed tomography (CT) images can be automated with convolutional neural networks (CNNs). Many of these studies focused on reporting…

Image and Video Processing · Electrical Eng. & Systems 2020-09-22 Coen de Vente , Luuk H. Boulogne , Kiran Vaidhya Venkadesh , Cheryl Sital , Nikolas Lessmann , Colin Jacobs , Clara I. Sánchez , Bram van Ginneken

The recent outbreak of COVID-19 has led to urgent needs for reliable diagnosis and management of SARS-CoV-2 infection. As a complimentary tool, chest CT has been shown to be able to reveal visual patterns characteristic for COVID-19, which…

Although previous infection and vaccination provide protection against SARS-CoV-2 infection, both reinfection and breakthrough infection are possible events whose occurrence would increase with time after first exposure to the antigen and…

Populations and Evolution · Quantitative Biology 2022-06-07 Ariel Félix Gualtieri , Carolina de la Cal , Augusto Francisco Toma , Pedro Hecht

The coronavirus disease (COVID-19) is rapidly spreading all over the world, and has infected more than 1,436,000 people in more than 200 countries and territories as of April 9, 2020. Detecting COVID-19 at early stage is essential to…

Computer Vision and Pattern Recognition · Computer Science 2020-05-21 Xi Ouyang , Jiayu Huo , Liming Xia , Fei Shan , Jun Liu , Zhanhao Mo , Fuhua Yan , Zhongxiang Ding , Qi Yang , Bin Song , Feng Shi , Huan Yuan , Ying Wei , Xiaohuan Cao , Yaozong Gao , Dijia Wu , Qian Wang , Dinggang Shen