Related papers: Unknotted cycles
A knot is an an embedding of a circle into three-dimensional space. We say that a knot is unknotted if there is an ambient isotopy of the embedding to a standard circle. By representing knots via planar diagrams, we discuss the problem of…
Diaconis and Graham studied a measure of distance from the identity in the symmetric group called total displacement and showed that it is bounded below by the sum of length and reflection length. They asked for a characterization of the…
We undertake a detailed investigation into the structure of permutations in monotone grid classes whose row-column graphs do not contain components with more than one cycle. Central to this investigation is a new decomposition, called the…
The graph of overlapping permutations is a directed graph that is an analogue to the De Bruijn graph. It consists of vertices that are permutations of length $n$ and edges that are permutations of length $n+1$ in which an edge $a_1\cdots…
Let $D$ be a knot diagram, and let ${\mathcal D}$ denote the set of diagrams that can be obtained from $D$ by crossing exchanges. If $D$ has $n$ crossings, then ${\mathcal D}$ consists of $2^n$ diagrams. A folklore argument shows that at…
We review the use of grid diagrams in the development of Heegaard Floer theory. We describe the construction of the combinatorial link Floer complex, and the resulting algorithm for unknot detection. We also explain how grid diagrams can be…
A permutation is defined to be cycle-up-down if it is a product of cycles that, when written starting with their smallest element, have an up-down pattern. We prove bijectively and analytically that these permutations are enumerated by the…
In this paper we introduce a representation of knots and links called a cube diagram. We show that a property of a cube diagram is a link invariant if and only if the property is invariant under two types of cube diagram operations. A knot…
In this paper, we study knot diagrams for which the underlying graph has treewidth two. We give a linear time algorithm for the following problem: given a knot diagram of treewidth two, does it represent the unknot? We also show that for a…
A classical knot is described by a one-stroke trajectory with entanglements of a string. The replica method appears as a powerful tool in statistical mechanics for a polymer or self-avoiding walk. We consider this replica N to 0 limit in…
We define half grid diagrams and prove every link is half grid presentable by constructing a canonical half grid pair (which gives rise to a grid diagram of some special type) associated with an element in the oriented Thompson group. We…
Breakpoint graphs are ubiquitous structures in the field of genome rearrangements. Their cycle decomposition has proved useful in computing and bounding many measures of (dis)similarity between genomes, and studying the distribution of…
A grid class consists of permutations whose pictorial depiction can be partitioned into increasing and decreasing parts as determined by a given matrix. In this paper, we introduce a method for enumerating cyclic permutations in vector grid…
We study random knotting by considering knot and link diagrams as decorated, (rooted) topological maps on spheres and pulling them uniformly from among sets of a given number of vertices $n$, as first established in recent work with…
In this article we discuss applications of neural networks to recognising knots and, in particular, to the unknotting problem. One of motivations for this study is to understand how neural networks work on the example of a problem for which…
We introduce a new combinatorial method to encode knots and links with applications to knot invariants. Clasp diagrams defined in this paper are combinatorial blueprints for building knot diagrams out of full twists on two strings rather…
The unknotting number is the classical invariant of a knot. However, its determination is difficult in general. To obtain the unknotting number from definition one has to investigate all possible diagrams of the knot. We tried to show the…
The presence of slipknots in configurations of proteins and DNA has been shown to affect their functionality, or alter it entirely. Historically, polymers are modeled as polygonal chains in space. As an alternative to space curves, we…
We introduce a new numerical invariant of knots and links from the descending diagrams. It is considered to live between the unknotting number and the bridge number.
We study petal diagrams of knots, which provide a method of describing knots in terms of permutations in a symmetric group $S_{2n+1}$. We define two classes of moves on such permutations, called trivial petal additions and crossing…