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We view molecular optimization as a graph-to-graph translation problem. The goal is to learn to map from one molecular graph to another with better properties based on an available corpus of paired molecules. Since molecules can be…

Machine Learning · Computer Science 2019-01-30 Wengong Jin , Kevin Yang , Regina Barzilay , Tommi Jaakkola

Graph signal processing extends spectral analysis to data supported on irregular domains. Existing fractional transforms for two-dimensional graph signals, including the two-dimensional graph fractional Fourier transform (GFRFT), typically…

Signal Processing · Electrical Eng. & Systems 2026-03-03 Mingzhi Wang , Manjun Cui , Feiyue Zhao , Yangfan He , Zhichao Zhang

The problem of classifying graphs is ubiquitous in machine learning. While it is standard to apply graph neural networks or graph kernel methods, Gaussian processes can be employed by transforming spatial features from the graph domain into…

Machine Learning · Computer Science 2025-02-04 Mathieu Alain , So Takao , Xiaowen Dong , Bastian Rieck , Emmanuel Noutahi

Time-varying graph signals are alternative representation of multivariate (or multichannel) signals in which a single time-series is associated with each of the nodes or vertex of a graph. Aided by the graph-theoretic tools, time-varying…

Signal Processing · Electrical Eng. & Systems 2023-01-10 Naveed ur Rehman

Graph signal processing (GSP) leverages the inherent signal structure within graphs to extract high-dimensional data without relying on translation invariance. It has emerged as a crucial tool across multiple fields, including learning and…

General Mathematics · Mathematics 2025-02-21 Yu Zhang , Bing-Zhao Li

Graph filtering is the cornerstone operation in graph signal processing (GSP). Thus, understanding it is key in developing potent GSP methods. Graph filters are local and distributed linear operations, whose output depends only on the local…

Signal Processing · Electrical Eng. & Systems 2022-12-21 T. Mitchell Roddenberry , Fernando Gama , Richard G. Baraniuk , Santiago Segarra

Representing and exploiting multivariate signals requires capturing relations between variables, which we can represent by graphs. Graph dictionaries allow to describe complex relational information as a sparse sum of simpler structures,…

Machine Learning · Computer Science 2026-01-09 William Cappelletti , Pascal Frossard

Convolutional Neural Networks are very efficient at processing signals defined on a discrete Euclidean space (such as images). However, as they can not be used on signals defined on an arbitrary graph, other models have emerged, aiming to…

Machine Learning · Computer Science 2019-05-03 Myriam Bontonou , Carlos Lassance , Jean-Charles Vialatte , Vincent Gripon

Signal processing on directed graphs (digraphs) is problematic, since the graph shift, and thus associated filters, are in general not diagonalizable. Furthermore, the Fourier transform in this case is now obtained from the Jordan…

Signal Processing · Electrical Eng. & Systems 2021-05-20 Bastian Seifert , Markus Püschel

The GraphBLAS standard (GraphBlas.org) is being developed to bring the potential of matrix based graph algorithms to the broadest possible audience. Mathematically the Graph- BLAS defines a core set of matrix-based graph operations that can…

We study distributed graph algorithms that adopt an iterative vertex-centric framework for graph processing, popularized by the Google's Pregel system. Since then, there are several attempts to implement many graph algorithms in a…

Databases · Computer Science 2016-12-23 Arijit Khan

We show that the problem of identifying different signal components from a time-frequency representation can be equivalently phrased as a graph clustering problem: given a graph $G=(V,E)$ one aims to identify `clusters', subgraphs that are…

Signal Processing · Electrical Eng. & Systems 2025-10-10 Marcelo A. Colominas , Stefan Steinerberger , Hau-Tieng Wu

Theoretical development and applications of graph signal processing (GSP) have attracted much attention. In classical GSP, the underlying structures are restricted in terms of dimensionality. A graph is a combinatorial object that models…

Signal Processing · Electrical Eng. & Systems 2020-05-26 Feng Ji , Giacomo Kahn , Wee Peng Tay

This paper introduces a design method for densergraph-frequency graph Fourier frames (DGFFs) to enhance graph signal processing and analysis. The graph Fourier transform (GFT) enables us to analyze graph signals in the graph spectral domain…

Signal Processing · Electrical Eng. & Systems 2025-03-18 Kaito Nitani , Seisuke Kyochi

Multiplex is a set of graphs on the same vertex set, i.e. $\{G(V,E_1),\ldots,G(V,E_m)\}$. It is a generalized graph to model multiple relationships with parallel edges between vertices. This paper is a literature review of existing…

Physics and Society · Physics 2015-06-19 Chuan Wen Loe , Henrik Jeldtoft Jensen

In many network problems, graphs may change by the addition of nodes, or the same problem may need to be solved in multiple similar graphs. This generates inefficiency, as analyses and systems that are not transferable have to be…

Signal Processing · Electrical Eng. & Systems 2019-11-11 Luana Ruiz , Luiz F. O. Chamon , Alejandro Ribeiro

Modern data introduces new challenges to classic signal processing approaches, leading to a growing interest in the field of graph signal processing. A powerful and well established model for real world signals in various domains is sparse…

Machine Learning · Computer Science 2019-03-27 Yael Yankelevsky , Michael Elad

With the growing demand for non-Euclidean data analysis, graph signal processing (GSP) has gained significant attention for its capability to handle complex time-varying data. This paper introduces a novel sampling method based on the joint…

General Mathematics · Mathematics 2025-06-03 Yu Zhang , Bing-Zhao Li

An emerging way of tackling the dimensionality issues arising in the modeling of a multivariate process is to assume that the inherent data structure can be captured by a graph. Nevertheless, though state-of-the-art graph-based methods have…

Machine Learning · Statistics 2016-07-13 Andreas Loukas , Nathanael Perraudin

Graph filters are one of the core tools in graph signal processing. A central aspect of them is their direct distributed implementation. However, the filtering performance is often traded with distributed communication and computational…

Signal Processing · Electrical Eng. & Systems 2019-05-01 Mario Coutino , Elvin Isufi , Geert Leus