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In this chapter, we consider the problem of designing protection strategies to contain spreading processes in complex cyber-physical networks. We illustrate our ideas using a family of bio-motivated spreading models originally proposed in…

Social and Information Networks · Computer Science 2016-09-30 Victor M. Preciado , Michael Zargham , Chinwendu Enyioha , Cameron Nowzari , Shuo Han , Masaki Ogura , Ali Jadbabaie , George Pappas

The giant single-celled slime mould Physarum polycephalum exhibits complex morphological adaptation and amoeboid movement as it forages for food and may be seen as a minimal example of complex robotic behaviour. Swarm computation has…

Multiagent Systems · Computer Science 2012-12-04 Jeff Jones , Andrew Adamatzky

In this paper, we discuss the existence and uniqueness of coexistence states for a class of non-local elliptic system. This problem models the behaviour of a bacteria and a living nutrient, whose diffusion depends on the population of the…

Analysis of PDEs · Mathematics 2024-02-06 M. A. V. Costa , Y. B. C. Carranza , C. Morales-Rodrigo , A. Suarez

With the integration of loads such as pulse power loads, a new control challenge is presented in meeting their high ramp rate requirements. Existing onboard generators are ramp rate limited. The inability to meet the load power due to ramp…

Optimization and Control · Mathematics 2024-07-31 Satish Vedula , Seyyed Shaho Alaviani , Olugbenga Moses Anubi

The present view of biological phenomena is based on a biochemical paradigm that development of living organisms is defined by information stored in a molecular form as some genetic code. However, new discoveries indicate that biological…

Other Quantitative Biology · Quantitative Biology 2023-11-14 Yuri K. Shestopaloff

In order to grow in any given environment, bacteria need to collect information about the medium composition and implement suitable growth strategies by adjusting their regulatory and metabolic degrees of freedom. In the standard sense,…

Biological Physics · Physics 2023-03-22 Anna Paola Muntoni , Andrea De Martino

Energy-based modelling brings engineering insight to the understanding of biomolecular systems. It is shown how well-established control engineering concepts, such as loop-gain, arise from energy feedback loops and are therefore amenable to…

Molecular Networks · Quantitative Biology 2021-03-30 Peter J Gawthrop

Deploying distributed renewable energy at the demand side is an important measure to implement a sustainable society. However, the massive small solar and wind generation units are beyond the control of a central operator. To encourage…

Optimization and Control · Mathematics 2021-02-23 Yue Chen , Wei Wei , Han Wang , Quan Zhou , João P. S. Catalão

We propose a model of antibiotic diffusion through a bacterial biofilm when diffusion and/or absorption barriers develop in the biofilm. The idea of this model is: We deduce details of the diffusion process in a medium in which direct…

Biological Physics · Physics 2020-09-23 Tadeusz Kosztołowicz , Ralf Metzler

A key problem toward the use of microorganisms as bio-factories is reaching and maintaining cellular communities at a desired density and composition so that they can efficiently convert their biomass into useful compounds. Promising…

Systems and Control · Electrical Eng. & Systems 2023-12-18 Sara Maria Brancato , Davide Salzano , Francesco De Lellis , Davide Fiore , Giovanni Russo , Mario di Bernardo

Mobile devices have become a popular tool for ubiquitous learning in recent years. Multiple mobile users can be connected via ad hoc networks for the purpose of learning. In this context, due to limited battery capacity, energy efficiency…

Networking and Internet Architecture · Computer Science 2020-08-14 Feng Xia , Xuhai Zhao , Jianhui Zhang , Jianhua Ma , Xiangjie Kong

Signal propagation over long distances is a ubiquitous feature of multicellular communities. In biofilms of the bacterium Bacillus subtilis, we recently discovered that some, but not all, cells participate in the propagation of an…

Biological Physics · Physics 2020-07-01 Xiaoling Zhai , Joseph W. Larkin , Kaito Kikuchi , Samuel E. Redford , Gürol M. Süel , Andrew Mugler

We propose a model of chemostat where the bacterial population is individually-based, each bacterium is explicitly represented and has a mass evolving continuously over time. The substrate concentration is represented as a conventional…

Probability · Mathematics 2013-11-08 Fabien Campillo , Coralie Fritsch

A primary motivation for our research in digital ecosystems is the desire to exploit the self-organising properties of biological ecosystems. Ecosystems are thought to be robust, scalable architectures that can automatically solve complex,…

Neural and Evolutionary Computing · Computer Science 2009-10-06 G. Briscoe , P. De Wilde

The design of biological networks using bacteria as the basic elements of the network is initially motivated by a phenomenon called quorum sensing. Through quorum sensing, each bacterium performs sensing the medium and communicating it to…

Information Theory · Computer Science 2012-05-23 Arash Einolghozati , Mohsen Sardari , Faramarz Fekri

Implicit policies parameterized by generative models, such as Diffusion Policy, have become the standard for policy learning and Vision-Language-Action (VLA) models in robotics. However, these approaches often suffer from high computational…

Robotics · Computer Science 2025-11-03 Travis Davies , Yiqi Huang , Alexi Gladstone , Yunxin Liu , Xiang Chen , Heng Ji , Huxian Liu , Luhui Hu

Storing memory for molecular recognition is an efficient strategy for responding to external stimuli. Biological processes use different strategies to store memory. In the olfactory cortex, synaptic connections form when stimulated by an…

Biological Physics · Physics 2021-06-07 Oskar H Schnaack , Luca Peliti , Armita Nourmohammad

Electrodynamic interactions between biomolecules are of potential biological interest for signaling warranting investigation of their activation through various mechanisms in living systems. Here, using as model system a light harvesting…

A factor effect study was conducted on a set of observations at the contingency of a series of plant species and bacteria species regarding the antibacterial activity of essential oil extracts. The study reveals a very good agreement…

Living systems continuously sense, integrate, and act on chemical information using multiscale biochemical networks whose dynamics are inherently nonlinear, adaptive, and energy-efficient. Yet, most attempts to harness such "wetware" for…

Emerging Technologies · Computer Science 2026-02-03 Ceylin Savas , Maryam Javed , Murat Kuscu
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