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Related papers: Partial Recovery in the Graph Alignment Problem

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The graph identification problem consists of discovering the interactions among nodes in a network given their state/feature trajectories. This problem is challenging because the behavior of a node is coupled to all the other nodes by the…

Systems and Control · Electrical Eng. & Systems 2023-10-24 Eduardo Sebastian , Thai Duong , Nikolay Atanasov , Eduardo Montijano , Carlos Sagues

The benefits of a recently proposed method to approximate hard optimization problems are demonstrated on the graph partitioning problem. The performance of this new method, called Extremal Optimization, is compared to Simulated Annealing in…

Statistical Mechanics · Physics 2009-10-31 S. Boettcher

We consider the Stochastic Matching problem, which is motivated by applications in kidney exchange and online dating. In this problem, we are given an undirected graph. Each edge is assigned a known, independent probability of existence and…

Data Structures and Algorithms · Computer Science 2020-10-19 Marek Adamczyk , Brian Brubach , Fabrizio Grandoni , Karthik A. Sankararaman , Aravind Srinivasan , Pan Xu

In this thesis, we present new techniques to deal with fundamental algorithmic graph problems where graphs are directed and partially dynamic, i.e. undergo either a sequence of edge insertions or deletions: - Single-Source Reachability…

Data Structures and Algorithms · Computer Science 2020-11-30 Maximilian Probst Gutenberg

We study a problem of reconstruction of connected graphs where the input gives all subsets of size k that induce a connected subgraph. Originally introduced by Bastide et al. (WG 2023) for triples ($k=3$), this problem received…

Combinatorics · Mathematics 2024-07-11 Kacper Kluk , Hoang La , Marta Piecyk

We study a blind deconvolution problem on graphs, which arises in the context of localizing a few sources that diffuse over networks. While the observations are bilinear functions of the unknown graph filter coefficients and sparse input…

Signal Processing · Electrical Eng. & Systems 2024-09-19 Chang Ye , Gonzalo Mateos

In this paper, matching pairs of stocahstically generated graphs in the presence of generalized seed side-information is considered. The graph matching problem emerges naturally in various applications such as social network…

Information Theory · Computer Science 2021-02-15 Mahshad Shariatnasab , Farhad Shirani , Siddharth Garg , Elza Erkip

Circle graphs are intersection graphs of chords of a circle. In this paper, we present a new algorithm for the circle graph isomorphism problem running in time $O((n+m)\alpha(n+m))$ where $n$ is the number of vertices, $m$ is the number of…

Data Structures and Algorithms · Computer Science 2019-08-27 Vít Kalisz , Pavel Klavík , Peter Zeman

We consider the problem of inferring the unobserved edges of a graph from data supported on its nodes. In line with existing approaches, we propose a convex program for recovering a graph Laplacian that is approximately diagonalizable by a…

Signal Processing · Electrical Eng. & Systems 2020-10-16 T. Mitchell Roddenberry , Madeline Navarro , Santiago Segarra

For a $d$-uniform random hypergraph on $n$ vertices in which hyperedges are included i.i.d.\ so that the average degree in the hypergraph is $n^{\delta+o(1)}$, the projection of such a hypergraph is a graph on the same $n$ vertices where an…

Statistics Theory · Mathematics 2026-04-03 Shuyang Gong , Zhangsong Li , Qiheng Xu

A useful approach to the mathematical analysis of large-scale biological networks is based upon their decompositions into monotone dynamical systems. This paper deals with two computational problems associated to finding decompositions…

Molecular Networks · Quantitative Biology 2007-05-23 Bhaskar DasGupta , German Andres Enciso , Eduardo Sontag , Yi Zhang

Subgraph isomorphism, also known as subgraph matching, is typically regarded as an NP-complete problem. This complexity is further compounded in practical applications where edge weights are real-valued and may be affected by measurement…

Machine Learning · Statistics 2025-06-24 Arpan Kusari , Wenbo Sun

We study the problem of edge partitioning, where the goal is to partition the edge set of a graph into several parts. The replication factor of a vertex $v$ is the number of parts that contain edges incident to $v$. The goal is to minimize…

Discrete Mathematics · Computer Science 2026-05-08 Alexander Yakunin , Andrey Kupavskii , Alexander Sushin , Stanislav Moiseev

We study the problem of erasure correction (node repair) for regenerating codes defined on graphs wherein the cost of transmitting the information to the failed node depends on the graphical distance from this node to the helper vertices of…

Information Theory · Computer Science 2022-01-19 Adway Patra , Alexander Barg

We consider the problem of self-healing in peer-to-peer networks that are under repeated attack by an omniscient adversary. We assume that, over a sequence of rounds, an adversary either inserts a node with arbitrary connections or deletes…

Data Structures and Algorithms · Computer Science 2012-08-08 Tom Hayes , Jared Saia , Amitabh Trehan

The past decades have witnessed the prosperity of graph mining, with a multitude of sophisticated models and algorithms designed for various mining tasks, such as ranking, classification, clustering and anomaly detection. Generally…

Machine Learning · Computer Science 2021-10-27 Zhe Xu , Boxin Du , Hanghang Tong

In Gaussian graphical model selection, noise-corrupted samples present significant challenges. It is known that even minimal amounts of noise can obscure the underlying structure, leading to fundamental identifiability issues. A recent line…

Machine Learning · Statistics 2024-05-09 Abrar Zahin , Rajasekhar Anguluri , Lalitha Sankar , Oliver Kosut , Gautam Dasarathy

When drawing graphs whose edges and nodes contain text or graphics, such informa tion needs to be displayed without overlaps, either as part of the initial layout or as a post-processing step. The core problem in removing overlaps lies in…

Discrete Mathematics · Computer Science 2016-09-08 Yifan Hu

Graph neural networks (GNNs) are increasingly used to model biological systems, yet the reliability of post-hoc explanation methods for recovering meaningful molecular mechanisms remains unclear. Here, we systematically evaluate four widely…

Molecular Networks · Quantitative Biology 2026-05-22 Kyle Higgins , Ivan Laponogov , Dennis Veselkov , Kirill Veselkov

We consider the problem of inferring a matching hidden in a weighted random $k$-hypergraph. We assume that the hyperedges' weights are random and distributed according to two different densities conditioning on the fact that they belong to…

Disordered Systems and Neural Networks · Physics 2022-11-11 Urte Adomaityte , Anshul Toshniwal , Gabriele Sicuro , Lenka Zdeborová
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