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Related papers: Two dimensional soliton in tumor induced angiogene…

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Recently, numerical simulations of a stochastic model have shown that the density of vessel tips in tumor induced angiogenesis adopts a soliton-like profile [Sci. Rep. 6, 31296 (2016)]. In this work, we derive and solve the equations for…

Biological Physics · Physics 2017-01-02 L. L. Bonilla , M. Carretero , F. Terragni

A recent conceptual model of tumor-driven angiogenesis including branching, elongation, and anastomosis of blood vessels captures some of the intrinsic multiscale structures of this complex system, yet allowing to extract a deterministic…

Tissues and Organs · Quantitative Biology 2016-02-24 F. Terragni , M. Carretero , V. Capasso , L. L. Bonilla

Angiogenesis is a multiscale process by which a primary blood vessel issues secondary vessel sprouts that reach regions lacking oxygen. Angiogenesis can be a natural process of organ growth and development or a pathological induced by a…

Analysis of PDEs · Mathematics 2022-10-28 Björn Birnir , Luis Bonilla , Manuel Carretero , Filippo Terragni

A coupled system of nonlinear mixed-type equations modeling early stages of angiogenesis is analyzed in a bounded domain. The system consists of stochastic differential equations describing the movement of the positions of the tip and stalk…

Analysis of PDEs · Mathematics 2022-06-24 Markus Fellner , Ansgar Jüngel

When modeling of tumor-driven angiogenesis, a major source of analytical and computational complexity is the strong coupling between the kinetic parameters of the relevant stochastic branching-and-growth of the capillary network, and the…

Tissues and Organs · Quantitative Biology 2014-12-24 L. L. Bonilla , V. Capasso , M. Alvaro , M. Carretero

We study a system of particles in a two-dimensional geometry that move according to a reinforced random walk with transition probabilities dependent on the solutions of reaction-diffusion equations for the underlying fields. A birth process…

Tissues and Organs · Quantitative Biology 2021-04-02 L. L. Bonilla , M. Carretero , F. Terragni

Complex biological processes involve collective behavior of entities (bacteria, cells, animals) over many length and time scales and can be described by discrete models that track individuals or by continuum models involving densities and…

Soft Condensed Matter · Physics 2023-11-16 F. Terragni , W. D. Martinson , M. Carretero , P. K. Maini , L. L. Bonilla

In this work, we present a coupled 3D-1D model of solid tumor growth within a dynamically changing vascular network to facilitate realistic simulations of angiogenesis. Additionally, the model includes erosion of the extracellular matrix,…

Tissues and Organs · Quantitative Biology 2021-06-23 Marvin Fritz , Prashant K. Jha , Tobias Köppl , J. Tinsley Oden , Andreas Wagner , Barbara Wohlmuth

Angiogenesis is the formation of new blood vessels from pre-existing ones in response to chemical signals secreted by, for example, a wound or a tumour. In this paper, we propose a mesoscopic lattice-based model of angiogenesis, in which…

Tissues and Organs · Quantitative Biology 2016-03-02 Fabian Spill , Pilar Guerrero , Tomas Alarcon , Philip K. Maini , Helen M. Byrne

Employing a novel two-dimensional computational model we have simulated the feedback between angiogenesis and tumor growth dynamics. Analyzing vessel formation and elongation towards the concentration gradient of the tumor-derived…

Tissues and Organs · Quantitative Biology 2007-05-23 Eun Bo Shim , Yoo Seok Kim , Thomas S. Deisboeck

Computational atomic-scale methods continue to provide new information about geometry, energetics, and transition states for interstitial elements in crystalline lattices. This data can be used to determine the diffusivity of interstitials…

Materials Science · Physics 2016-07-13 Dallas R. Trinkle

In the field of Life Sciences it it very common to deal with extremely complex systems, from both analytical and computational points of view, due to the unavoidable coupling of different interacting structures. As an example, angiogenesis…

Probability · Mathematics 2017-08-15 Vincenzo Capasso , Franco Flandoli

Hypoxy induced angiogenesis processes can be described coupling an integrodifferential kinetic equation of Fokker-Planck type with a diffusion equation for the angiogenic factor. We propose high order positivity preserving schemes to…

Numerical Analysis · Mathematics 2021-03-22 A. Carpio , E. Cebrian

We propose an alternative method for one-dimensional continuum diffusion models with spatially variable (heterogeneous) diffusivity. Our method, which extends recent work on stochastic diffusion, assumes the constant-coefficient homogenized…

Computational Physics · Physics 2019-12-18 Elliot J. Carr

We develop an agent-based model of vasculogenesis, the de novo formation of blood vessels. Endothelial cells in the vessel network are viewed as linearly elastic spheres and are of two types: vessel elements are contained within the…

Quantitative Methods · Quantitative Biology 2016-10-04 Holger Perfahl , Barry D Hughes , Tomas Alaracon , Philip K Maini , Mark C Lloyd , Matthias Reuss , Helen M Byrne

We introduce a model of media with the cubic attractive nonlinearity concentrated along a single or double stripe in the two-dimensional (2D) plane. The model can be realized in terms of nonlinear optics (in the spatial and temporal domains…

Pattern Formation and Solitons · Physics 2010-06-21 Nguyen Viet Hung , Pawe\lZiń , Marek Trippenbach , Boris A. Malomed

Angiogenesis is a key process in the tumoral growth which allows the cancerous tissue to impact on its vasculature in order to improve the nutrient's supply and the metastatic process. In this paper, we introduce a model for the density of…

Analysis of PDEs · Mathematics 2010-09-16 Sebastien Benzekry

We study a simplified stochastic model for the vascularization of a growing tumor, incorporating the formation of new blood vessels at the tumor periphery as well as their regression in the tumor center. The resulting morphology of the…

Cell Behavior · Quantitative Biology 2009-09-16 Raja Paul

A dispersion-managed optical system with step-wise periodical variation of dispersion is studied in a strong dispersion map limit in the framework of path-averaged Gabitov-Turitsyn equation. The soliton solution is obtained by iterating the…

Pattern Formation and Solitons · Physics 2009-11-07 P. M. Lushnikov

In this study, we model avascular tumour growth in epithelial tissue. This can help us to get a macroscopic view of the interaction between the tumour with its surrounding microenvironment and the physical changes within the tumour…

Tissues and Organs · Quantitative Biology 2019-05-15 Sounak Sadhukhan , S. K. Basu
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