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Compressed indexing is a powerful technique that enables efficient querying over data stored in compressed form, significantly reducing memory usage and often accelerating computation. While extensive progress has been made for…

Data Structures and Algorithms · Computer Science 2025-10-23 Rajat De , Dominik Kempa

In a previous paper we generalized the Knuth-Morris-Pratt (KMP) pattern matching algorithm and defined a non-conventional kind of RAM, the MP--RAMs (RAMS equipped with extra operations), and designed an O(n) on-line algorithm for solving…

Data Structures and Algorithms · Computer Science 2021-10-26 Patrick Cegielski , Irene Guessarian , Yuri Matiyasevich

Recently multi-lingual pre-trained language models (PLM) such as mBERT and XLM-R have achieved impressive strides in cross-lingual dense retrieval. Despite its successes, they are general-purpose PLM while the multilingual PLM tailored for…

Computation and Language · Computer Science 2025-09-08 Shunyu Zhang , Yaobo Liang , Ming Gong , Daxin Jiang , Nan Duan

The Partitioning Min-Max Weighted Matching (PMMWM) problem is an NP-hard problem that combines the problem of partitioning a group of vertices of a bipartite graph into disjoint subsets with limited size and the classical Min-Max Weighted…

Data Structures and Algorithms · Computer Science 2022-01-26 Yuxuan Wang , Jinyao Xie , Jiongzhi Zheng , Kun He

In this paper, a fully compressed pattern matching problem is studied. The compression is represented by straight-line programs (SLPs), i.e. a context-free grammars generating exactly one string; the term fully means that both the pattern…

Data Structures and Algorithms · Computer Science 2013-06-26 Artur Jeż

In this paper we consider several variants of the pattern matching problem. In particular, we investigate the following problems: 1) Pattern matching with k mismatches; 2) Approximate counting of mismatches; and 3) Pattern matching with…

Data Structures and Algorithms · Computer Science 2013-07-05 Marius Nicolae , Sanguthevar Rajasekaran

Pattern matching with wildcards is the problem of finding all factors of a text $t$ of length $n$ that match a pattern $x$ of length $m$, where wildcards (characters that match everything) may be present. In this paper we present a number…

Data Structures and Algorithms · Computer Science 2016-01-15 Carl Barton

Given a text and a pattern over an alphabet, the pattern matching problem searches for all occurrences of the pattern in the text. An equivalence relation $\approx$ is called a substring consistent equivalence relation (SCER), if for two…

Data Structures and Algorithms · Computer Science 2022-07-28 Davaajav Jargalsaikhan , Diptarama Hendrian , Ryo Yoshinaka , Ayumi Shinohara

In this paper we study a variant of string pattern matching which deals with tuples of strings known as \textit{multi-track strings}. Multi-track strings are a generalisation of strings (or \textit{single-track strings}) that have primarily…

Data Structures and Algorithms · Computer Science 2019-12-02 Carl Barton , Ewan Birney , Tomas Fitzgerald

The parameterized matching problem is a variant of string matching, which is to search for all parameterized occurrences of a pattern $P$ in a text $T$. In considering matching algorithms, the combinatorial natures of strings, especially…

Data Structures and Algorithms · Computer Science 2023-06-21 Haruki Ideguchi , Diptarama Hendrian , Ryo Yoshinaka , Ayumi Shinohara

Described are two algorithms to find long approximate palindromes in a string, for example a DNA sequence. A simple algorithm requires O(n)-space and almost always runs in $O(k.n)$-time where n is the length of the string and k is the…

Data Structures and Algorithms · Computer Science 2007-05-23 L. Allison

In this paper, we describe a new type of match between a pattern and a text that aren't necessarily maximal in the query, but still contain useful matching information: locally maximal exact matches (LEMs). There are usually a large amount…

Data Structures and Algorithms · Computer Science 2025-05-22 Ahsan Sanaullah , Degui Zhi , Shaojie Zhang

The circuit-level implementation of a quantum string-matching algorithm, which matches a search string (pattern) of length $M$ inside a longer text of length $N$, has already been demonstrated in the literature to outperform its classical…

Quantum Physics · Physics 2023-04-07 Amit Saha , Om Khanna

Dictionary learning (DL) is a core tool in signal processing and machine learning for discovering sparse representations of data. In contrast with classical successes, there is currently no practical quantum dictionary learning algorithm.…

Quantum Physics · Physics 2026-01-13 Angshul Majumdar

A pattern p (i.e., a string of variables and terminals) matches a word w, if w can be obtained by uniformly replacing the variables of p by terminal words. The respective matching problem, i.e., deciding whether or not a given pattern…

Data Structures and Algorithms · Computer Science 2019-07-30 Florin Manea , Markus L. Schmid

A weighted string over an alphabet of size $\sigma$ is a string in which a set of letters may occur at each position with respective occurrence probabilities. Weighted strings, also known as position weight matrices or uncertain sequences,…

Data Structures and Algorithms · Computer Science 2015-12-09 Carl Barton , Chang Liu , Solon P. Pissis

In the Maximum Duo-Preservation String Mapping problem we are given two strings and wish to map the letters of the former to the letters of the latter so as to maximise the number of duos. A duo is a pair of consecutive letters that is…

Data Structures and Algorithms · Computer Science 2017-05-31 Bartłomiej Dudek , Paweł Gawrychowski , Piotr Ostropolski-Nalewaja

Longest common substring (LCS), longest palindrome substring (LPS), and Ulam distance (UL) are three fundamental string problems that can be classically solved in near linear time. In this work, we present sublinear time quantum algorithms…

Quantum Physics · Physics 2023-12-29 François Le Gall , Saeed Seddighin

Approximate pattern matching is a natural and well-studied problem on strings: Given a text $T$, a pattern $P$, and a threshold $k$, find (the starting positions of) all substrings of $T$ that are at distance at most $k$ from $P$. We…

Data Structures and Algorithms · Computer Science 2020-11-17 Panagiotis Charalampopoulos , Tomasz Kociumaka , Philip Wellnitz

We consider the problem of matching a metric space $(X,d_X)$ of size $k$ with a subspace of a metric space $(Y,d_Y)$ of size $n \geq k$, assuming that these two spaces have constant doubling dimension $\delta$. More precisely, given an…

Data Structures and Algorithms · Computer Science 2020-12-22 Corentin Allair , Antoine Vigneron
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