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Chain event graphs are a family of probabilistic graphical models that generalise Bayesian networks and have been successfully applied to a wide range of domains. Unlike Bayesian networks, these models can encode context-specific…

Methodology · Statistics 2022-11-08 Aditi Shenvi , Silvia Liverani

The Dynamical Graph Grammar (DGG) formalism can describe complex system dynamics with graphs that are mapped into a master equation. An exact stochastic simulation algorithm may be used, but it is slow for large systems. To overcome this…

Quantitative Methods · Quantitative Biology 2024-07-16 Eric Medwedeff , Eric Mjolsness

A new class of models for dynamic networks is proposed, called mutually exciting point process graphs (MEG). MEG is a scalable network-wide statistical model for point processes with dyadic marks, which can be used for anomaly detection…

Social and Information Networks · Computer Science 2023-10-25 Francesco Sanna Passino , Nicholas A. Heard

Directed acyclic graphs (DAGs) are central to science and engineering applications including causal inference, scheduling, and neural architecture search. In this work, we introduce the DAG Convolutional Network (DCN), a novel graph neural…

Signal Processing · Electrical Eng. & Systems 2026-05-20 Samuel Rey , Hamed Ajorlou , Gonzalo Mateos

We propose a generative model for single-channel EEG that incorporates the constraints experts actively enforce during visual scoring. The framework takes the form of a dynamic Bayesian network with depth in both the latent variables and…

Machine Learning · Computer Science 2021-03-04 Carlos A. Loza , Laura L. Colgin

Temporal knowledge graphs, representing the dynamic relationships and interactions between entities over time, have been identified as a promising approach for event forecasting. However, a limitation of most temporal knowledge graph…

Artificial Intelligence · Computer Science 2023-08-30 Yi Xu , Junjie Ou , Hui Xu , Luoyi Fu , Lei Zhou , Xinbing Wang , Chenghu Zhou

Motivation: Several different threads of research have been proposed for modeling and mining temporal data. On the one hand, approaches such as dynamic Bayesian networks (DBNs) provide a formal probabilistic basis to model relationships…

Machine Learning · Computer Science 2009-04-15 Debprakash Patnaik , Srivatsan Laxman , Naren Ramakrishnan

Complex spatial dependencies in transportation networks make traffic prediction extremely challenging. Much existing work is devoted to learning dynamic graph structures among sensors, and the strategy of mining spatial dependencies from…

Machine Learning · Computer Science 2023-12-20 Yujie Li , Zezhi Shao , Yongjun Xu , Qiang Qiu , Zhaogang Cao , Fei Wang

We introduce the framework of continuous-depth graph neural networks (GNNs). Neural graph differential equations (Neural GDEs) are formalized as the counterpart to GNNs where the input-output relationship is determined by a continuum of GNN…

Machine Learning · Computer Science 2021-06-23 Michael Poli , Stefano Massaroli , Clayton M. Rabideau , Junyoung Park , Atsushi Yamashita , Hajime Asama , Jinkyoo Park

Given entities and their interactions in the web data, which may have occurred at different time, how can we find communities of entities and track their evolution? In this paper, we approach this important task from graph clustering…

Social and Information Networks · Computer Science 2023-03-29 Namyong Park , Ryan Rossi , Eunyee Koh , Iftikhar Ahamath Burhanuddin , Sungchul Kim , Fan Du , Nesreen Ahmed , Christos Faloutsos

Disease-gene prediction (DGP) refers to the computational challenge of predicting associations between genes and diseases. Effective solutions to the DGP problem have the potential to accelerate the therapeutic development pipeline at early…

Machine Learning · Computer Science 2019-07-15 Vikash Singh , Pietro Lio'

Temporal Graph Clustering (TGC) is a new task with little attention, focusing on node clustering in temporal graphs. Compared with existing static graph clustering, it can find the balance between time requirement and space requirement…

Machine Learning · Computer Science 2026-01-21 Meng Liu , Ke Liang , Siwei Wang , Xingchen Hu , Sihang Zhou , Xinwang Liu

Time series graphical models have recently received considerable attention for characterizing (conditional) dependence structures in multivariate time series. In many applications, the multivariate series exhibit variable-partitioned…

Methodology · Statistics 2026-04-09 Qin Fang , Xinghao Qiao , Zihan Wang

Probabilistic dependency graphs (PDGs) are a flexible class of probabilistic graphical models, subsuming Bayesian Networks and Factor Graphs. They can also capture inconsistent beliefs, and provide a way of measuring the degree of this…

Data Structures and Algorithms · Computer Science 2023-11-10 Oliver E. Richardson , Joseph Y. Halpern , Christopher De Sa

Accurate epidemic forecasting is a critical task in controlling disease transmission. Many deep learning-based models focus only on static or dynamic graphs when constructing spatial information, ignoring their relationship. Additionally,…

Machine Learning · Computer Science 2023-12-04 Junkai Mao , Yuexing Han , Gouhei Tanaka , Bing Wang

Directed Acyclic Graphs (DAGs) are central to uncovering causal structure in complex systems, yet learning a single DAG from data is often challenging: model uncertainty, finite samples, and a combinatorially large search space frequently…

Methodology · Statistics 2026-05-19 Yunan Wu , Yue Wang , Chunlin Li , Chenglong Ye

Temporal Graph Networks (TGNs) have demonstrated significant success in dynamic graph tasks such as link prediction and node classification. Both tasks comprise transductive settings, where the model predicts links among known nodes, and in…

Machine Learning · Computer Science 2025-04-16 Jiafeng Xiong , Rizos Sakellariou

Dynamic graphs (DGs), which capture time-evolving relationships between graph entities, have widespread real-world applications. To efficiently encode DGs for downstream tasks, most dynamic graph neural networks follow the traditional…

Machine Learning · Computer Science 2025-01-31 Xiang Wu , Xunkai Li , Rong-Hua Li , Kangfei Zhao , Guoren Wang

The recent deep generative models for static graphs that are now being actively developed have achieved significant success in areas such as molecule design. However, many real-world problems involve temporal graphs whose topology and…

Machine Learning · Computer Science 2021-03-09 Liming Zhang , Liang Zhao , Shan Qin , Dieter Pfoser

Contagion dynamics in complex networks drive critical phenomena such as epidemic spread and information diffusion,but their analysis remains computationally prohibitive in large-scale, high-complexity systems. Here, we introduce the…

Physics and Society · Physics 2024-12-31 Leyang Xue , Zengru Di , An Zeng
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