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We develop a new class of random graph models for the statistical estimation of network formation -- subgraph generated models (SUGMs). Various subgraphs -- e.g., links, triangles, cliques, stars -- are generated and their union results in…

Physics and Society · Physics 2024-11-27 Arun G. Chandrasekhar , Matthew O. Jackson

A network can be analyzed at different topological scales, ranging from single nodes to motifs, communities, up to the complete structure. We propose a novel intermediate-level topological analysis that considers non-overlapping subgraphs…

Computational Physics · Physics 2009-11-13 Lucas Antiqueira , Luciano da Fontoura Costa

Traditional random graph models of networks generate networks that are locally tree-like, meaning that all local neighborhoods take the form of trees. In this respect such models are highly unrealistic, most real networks having strongly…

Statistical Mechanics · Physics 2011-03-02 Brian Karrer , M. E. J. Newman

Subgraph densities play a crucial role in network analysis, especially for the identification and interpretation of meaningful substructures in complex graphs. Localized subgraph densities, in particular, can provide valuable insights into…

Social and Information Networks · Computer Science 2025-05-23 Connor Mattes , Esha Datta , Ali Pinar

The threshold network model is a type of finite random graphs. In this paper, we introduce a generalized threshold network model. A pair of vertices with random weights is connected by an edge when real-valued functions of the pair of…

Probability · Mathematics 2010-10-12 Yusuke Ide , Norio Konno , Naoki Masuda

We consider that a network is an observation, and a collection of observed networks forms a sample. In this setting, we provide methods to test whether all observations in a network sample are drawn from a specified model. We achieve this…

Methodology · Statistics 2020-04-17 P-A. G. Maugis , Carey E. Priebe , S. C. Olhede , P. J. Wolfe

Many real-world networks describe systems in which interactions decay with the distance between nodes. Examples include systems constrained in real space such as transportation and communication networks, as well as systems constrained in…

Statistical Mechanics · Physics 2009-11-10 Shalev Itzkovitz , Uri Alon

Computing subgraph frequencies is a fundamental task that lies at the core of several network analysis methodologies, such as network motifs and graphlet-based metrics, which have been widely used to categorize and compare networks from…

Data Structures and Algorithms · Computer Science 2021-12-30 Pedro Ribeiro , Pedro Paredes , Miguel E. P. Silva , David Aparicio , Fernando Silva

We develop random graph models where graphs are generated by connecting not only pairs of vertices by edges but also larger subsets of vertices by copies of small atomic subgraphs of arbitrary topology. This allows the for the generation of…

Statistics Theory · Mathematics 2021-04-21 Anatol E. Wegner , Sofia Olhede

Metric graph properties lie in the heart of the analysis of complex networks, while in this paper we study their convexity through mathematical definition of a convex subgraph. A subgraph is convex if every geodesic path between the nodes…

Social and Information Networks · Computer Science 2018-05-31 Tilen Marc , Lovro Šubelj

Several natural and theoretical networks can be broken down into smaller portions, or subgraphs corresponding to neighborhoods. The more frequent of these neighborhoods can then be understood as motifs of the network, being therefore…

Physics and Society · Physics 2022-04-21 Guilherme S. Domingues , Eric K. Tokuda , Luciano da F. Costa

Recent evidence indicates that the abundance of recurring elementary interaction patterns in complex networks, often called subgraphs or motifs, carry significant information about their function and overall organization. Yet, the…

Disordered Systems and Neural Networks · Physics 2009-11-10 A. Vazquez , R. Dobrin , D. Sergi , J. -P. Eckmann , Z. N. Oltvai , A. -L. Barabasi

Clusters or communities can provide a coarse-grained description of complex systems at multiple scales, but their detection remains challenging in practice. Community detection methods often define communities as dense subgraphs, or…

Graphs are a powerful way to model interactions and relationships in data from a wide variety of application domains. In this setting, entities represented by vertices at the "center" of the graph are often more important than those…

Social and Information Networks · Computer Science 2014-11-06 Michael P. O'Brien , Blair D. Sullivan

Many real-world applications give rise to large heterogeneous networks where nodes and edges can be of any arbitrary type (e.g., user, web page, location). Special cases of such heterogeneous graphs include homogeneous graphs, bipartite,…

Social and Information Networks · Computer Science 2019-05-14 Ryan A. Rossi , Nesreen K. Ahmed , Aldo Carranza , David Arbour , Anup Rao , Sungchul Kim , Eunyee Koh

One property of networks that has received comparatively little attention is hierarchy, i.e., the property of having vertices that cluster together in groups, which then join to form groups of groups, and so forth, up through all levels of…

Physics and Society · Physics 2008-04-12 Aaron Clauset , Cristopher Moore , M. E. J. Newman

Complex networks has been a hot topic of research over the past several years over crossing many disciplines, starting from mathematics and computer science and ending by the social and biological sciences. Random graphs were studied to…

Computers and Society · Computer Science 2021-01-28 Alaa Eddin Alchalabi

The local structure of unweighted networks can be characterized by the number of times a subgraph appears in the network. The clustering coefficient, reflecting the local configuration of triangles, can be seen as a special case of this…

Statistical Mechanics · Physics 2009-11-10 J. -P. Onnela , J. Saramäki , J. Kertész , K. Kaski

Small-world networks, known for high local clustering and short path lengths, are a fundamental structure in many real-world systems, including social, biological, and technological networks. We apply the theory of (marked) local…

Probability · Mathematics 2026-04-29 Yeganeh Alimohammadi , Senem Işık , Amin Saberi

Counts of small subgraphs, or graphlet counts, are widely applicable to measure graph similarity. Computing graphlet counts can be computationally expensive and may pose obstacles in network analysis. We study the role of cliques in…

Social and Information Networks · Computer Science 2024-01-09 Anthony Bonato , Zhiyuan Zhang
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