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We present the BayesBD package providing Bayesian inference for boundaries of noisy images. The BayesBD package implements flexible Gaussian process priors indexed by the circle to recover the boundary in a binary or Gaussian noised image,…

Computation · Statistics 2017-08-23 Nicholas Syring , Meng Li

Many recent statistical applications involve inference under complex models, where it is computationally prohibitive to calculate likelihoods but possible to simulate data. Approximate Bayesian Computation (ABC) is devoted to these complex…

Populations and Evolution · Quantitative Biology 2011-06-15 Katalin Csilléry , Olivier François , Michael GB Blum

Astronomical data is often uncertain with errors that are heteroscedastic (different for each data point) and covariant between different dimensions. Assuming that a set of D-dimensional data points can be described by a (D - 1)-dimensional…

Instrumentation and Methods for Astrophysics · Physics 2015-10-21 A. S. G. Robotham , D. Obreschkow

Large Language Models (LLMs) face significant limitations when applied to large-scale graphs, struggling with context constraints and inflexible reasoning. We present GraphChain, a framework that enables LLMs to analyze complex graphs…

Artificial Intelligence · Computer Science 2025-11-11 Chunyu Wei , Wenji Hu , Xingjia Hao , Xin Wang , Yifan Yang , Yueguo Chen , Yang Tian , Yunhai Wang

Smoothing is often used to improve the readability and interpretability of noisy areal data. However there are many instances where the underlying quantity is discontinuous. In this case, specific methods are needed to estimate the…

Methodology · Statistics 2025-05-20 Vivien Goepp , Jan van de Kassteele

The Gaussian graphical model (GGM) incorporates an undirected graph to represent the conditional dependence between variables, with the precision matrix encoding partial correlation between pair of variables given the others. To achieve…

Methodology · Statistics 2023-07-03 Yueqi Qian , Xianghong Hu , Can Yang

We present fplyr, a new package for the R language to deal with big files. It allows users to easily implement the split-apply-combine strategy for files that are too big to fit into the available memory, without relying on data bases nor…

Computation · Statistics 2020-06-23 Federico Marotta

We introduce a novel method for discerning optical telescope images of stars from those of galaxies using Gaussian processes (GPs). Although applications of GPs often struggle in high-dimensional data modalities such as optical image…

Instrumentation and Methods for Astrophysics · Physics 2022-03-14 Amanda L. Muyskens , Imène R. Goumiri , Benjamin W. Priest , Michael D. Schneider , Robert E. Armstrong , Jason M. Bernstein , Ryan Dana

This article introduces GuessCompx which is an R package that performs an empirical estimation on the time and memory complexities of an algorithm or a function. It tests multiple increasing-sizes samples of the user's data and attempts to…

Data Structures and Algorithms · Computer Science 2020-10-22 Marc Agenis-Nevers , Neeraj Dhanraj Bokde , Zaher Mundher Yaseen , Mayur Shende

Gaussian graphical models provide a powerful framework for uncovering conditional dependence relationships between sets of nodes; they have found applications in a wide variety of fields including sensor and communication networks, physics,…

Machine Learning · Statistics 2024-10-28 Tianyi Yao , Minjie Wang , Genevera I. Allen

High-dimensional time series analysis has become increasingly important in fields such as finance, economics, and biology. The two primary tasks for high-dimensional time series analysis are modeling and statistical inference, which aim to…

Computation · Statistics 2024-12-24 Jinyuan Chang , Jing He , Chen Lin , Qiwei Yao

The R software package rSPDE contains methods for approximating Gaussian random fields based on fractional-order stochastic partial differential equations (SPDEs). A common example of such fields are Whittle-Mat\'ern fields on bounded…

Computation · Statistics 2025-02-28 David Bolin , Alexandre B. Simas

Higher-dimensional orthogonal packing problems have a wide range of practical applications, including packing, cutting, and scheduling. Previous efforts for exact algorithms have been unable to avoid structural problems that appear for…

Data Structures and Algorithms · Computer Science 2007-05-23 Sandor P. Fekete , Joerg Schepers

Large-scale graphs are valuable for graph representation learning, yet the abundant data in these graphs hinders the efficiency of the training process. Graph condensation (GC) alleviates this issue by compressing the large graph into a…

Machine Learning · Computer Science 2024-07-11 Yilun Liu , Ruihong Qiu , Zi Huang

Uncertainty estimation is essential for enhancing the reliability of Large Language Models (LLMs), particularly in high-stakes applications. Existing methods often overlook semantic dependencies, relying on token-level probability measures…

Computation and Language · Computer Science 2025-09-10 Tuo Wang , Adithya Kulkarni , Tyler Cody , Peter A. Beling , Yujun Yan , Dawei Zhou

In the context of paid research studies and clinical trials, budget considerations often require patient sampling from available populations which comes with inherent constraints. We introduce the R package CDsampling, which is the first to…

Computation · Statistics 2025-09-30 Yifei Huang , Liping Tong , Jie Yang

In this manuscript a unified framework for conducting inference on complex aggregated data in high dimensional settings is proposed. The data are assumed to be a collection of multiple non-Gaussian realizations with underlying undirected…

Applications · Statistics 2013-10-14 Fang Han , Han Liu , Brian Caffo

Big data are data on a massive scale in terms of volume, intensity, and complexity that exceed the capacity of standard software tools. They present opportunities as well as challenges to statisticians. The role of computational…

Computation · Statistics 2018-06-13 Chun Wang , Ming-Hui Chen , Elizabeth Schifano , Jing Wu , Jun Yan

Large Language Models are increasingly used by students to explore advanced material in computer science, including graph theory. As these tools become integrated into undergraduate and graduate coursework, it is important to understand how…

Artificial Intelligence · Computer Science 2026-02-06 Adithya Kulkarni , Mohna Chakraborty , Jay Bagga

The graphical lasso (glasso) is a widely-used fast algorithm for estimating sparse inverse covariance matrices. The glasso solves an L1 penalized maximum likelihood problem and is available as an R library on CRAN. The output from the…

Machine Learning · Statistics 2012-07-25 Benjamin T. Rolfs , Bala Rajaratnam
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