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We solve the problem of finding interspersed maximal repeats using a suffix array construction. As it is well known, all the functionality of suffix trees can be handled by suffix arrays, gaining practicality. Our solution improves the…

Data Structures and Algorithms · Computer Science 2013-04-03 Veronica Becher , Alejandro Deymonnaz , Pablo Ariel Heiber

In this paper, we revisit the much studied problem of Pattern Matching with Swaps (Swap Matching problem, for short). We first present a graph-theoretic model, which opens a new and so far unexplored avenue to solve the problem. Then, using…

Data Structures and Algorithms · Computer Science 2013-09-19 Pritom Ahmed , Costas S. Iliopoulos , A. S. M. Sohidull Islam , M. Sohel Rahman

We consider predictions of the random number and the magnitude of each iid component in a random sum based on its distributional structure, where only a total value of the sum is available and where iid random components are non-negative.…

Probability · Mathematics 2015-07-13 Muneya Matsui

We revisit the classic border tree data structure [Gu, Farach, Beigel, SODA 1994] that answers the following prefix-suffix queries on a string $T$ of length $n$ over an integer alphabet $\Sigma=[0,\sigma)$: for any $i,j \in [0,n)$ return…

Data Structures and Algorithms · Computer Science 2024-11-07 Solon P. Pissis

In optimization or machine learning problems we are given a set of items, usually points in some metric space, and the goal is to minimize or maximize an objective function over some space of candidate solutions. For example, in clustering…

Machine Learning · Computer Science 2020-11-19 Dan Feldman

In the kSUM problem we are given an array of numbers $a_1,a_2,...,a_n$ and we are required to determine if there are $k$ different elements in this array such that their sum is 0. This problem is a parameterized version of the well-studied…

Data Structures and Algorithms · Computer Science 2018-07-11 Isaac Goldstein , Moshe Lewenstein , Ely Porat

This paper considers a natural generalization of the online list access problem in the paid exchange model, where additionally there can be precedence constraints ("dependencies") among the nodes in the list. For example, this…

Data Structures and Algorithms · Computer Science 2021-04-20 Maciej Pacut , Juan Vanerio , Vamsi Addanki , Arash Pourdamghani , Gabor Retvari , Stefan Schmid

In this paper we will describe a new approach on the well-known suffix-array algorithm using Big Table Data Technology. We will demonstrate how it is possible to refactor a well-known algorithm coupled by taking advantage of an…

Databases · Computer Science 2020-03-26 Piero Giacomelli

Relational queries, and in particular join queries, often generate large output results when executed over a huge dataset. In such cases, it is often infeasible to store the whole materialized output if we plan to reuse it further down a…

Databases · Computer Science 2018-03-28 Shaleen Deep , Paraschos Koutris

Maximum subarray is a classical problem in computer science that given an array of numbers aims to find a contiguous subarray with the largest sum. We focus on its use for a noisy statistical problem of localizing an interval with a mean…

Methodology · Statistics 2023-10-24 Dennis Wei , Dmitry M. Malioutov

Previous compact representations of permutations have focused on adding a small index on top of the plain data $<\pi(1), \pi(2),...\pi(n)>$, in order to efficiently support the application of the inverse or the iterated permutation. In this…

Data Structures and Algorithms · Computer Science 2011-08-23 Jérémy Barbay , Gonzalo Navarro

We present a super-high-efficiency approximate computing scheme for series sum and discrete Fourier transform. The summation of a series sum or a discrete Fourier transform is approximated by summing over part of the terms multiplied by…

Numerical Analysis · Mathematics 2013-12-09 Xin-Zhong Yan

Nowadays, parallel computing is ubiquitous in several application fields, both in engineering and science. The computations rely on the floating-point arithmetic specified by the IEEE754 Standard. In this context, an elementary brick of…

Computation and Language · Computer Science 2022-05-12 Farah Benmouhoub , Pierre-Loïc Garoche , Matthieu Martel

A uniformization of a binary relation is a function that is contained in the relation and has the same domain as the relation. The synthesis problem asks for effective uniformization for classes of relations and functions that can be…

Formal Languages and Automata Theory · Computer Science 2018-05-08 Sarah Winter

This dissertation focuses on two fundamental sorting problems: string sorting and suffix sorting. The first part considers parallel string sorting on shared-memory multi-core machines, the second part external memory suffix sorting using…

Data Structures and Algorithms · Computer Science 2018-08-06 Timo Bingmann

Compressed bitmap indexes are used to speed up simple aggregate queries in databases. Indeed, set operations like intersections, unions and complements can be represented as logical operations (AND,OR,NOT) that are ideally suited for…

Databases · Computer Science 2016-01-11 Owen Kaser , Daniel Lemire

The list update problem is one of the oldest and simplest problems in online algorithms: A set of items must be maintained in a list while requests to these items arrive over time. Whenever an item is requested, the algorithm pays a cost…

Data Structures and Algorithms · Computer Science 2026-03-12 Christian Coester

We consider the offline sorting buffer problem. The input is a sequence of items of different types. All items must be processed one by one by a server. The server is equipped with a random-access buffer of limited capacity which can be…

Data Structures and Algorithms · Computer Science 2010-09-23 Ho-Leung Chan , Nicole Megow , Rob van Stee , Rene Sitters

We introduce the strongly NP-complete pagination problem, an extension of BIN PACKING where packing together two items may make them occupy less volume than the sum of their individual sizes. To achieve this property, an item is defined as…

Data Structures and Algorithms · Computer Science 2017-09-06 Aristide Grange , Imed Kacem , Sébastien Martin

The invention of transformer-based models such as BERT, GPT, and RoBERTa has enabled researchers and financial companies to finetune these powerful models and use them in different downstream tasks to achieve state-of-the-art performance.…

Computation and Language · Computer Science 2022-11-11 Sudhandar Balakrishnan , Yihao Fang , Xioadan Zhu