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Phase-contrast magnetic resonance imaging (MRI) provides time-resolved quantification of blood flow dynamics that can aid clinical diagnosis. Long in vivo scan times due to repeated three-dimensional (3D) volume sampling over cardiac phases…

Image and Video Processing · Electrical Eng. & Systems 2020-04-22 Valery Vishnevskiy , Jonas Walheim , Sebastian Kozerke

In recent years graphical processing units (GPUs) have become a powerful tool in scientific computing. Their potential to speed up highly parallel applications brings the power of high performance computing to a wider range of users.…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-04-26 Uldis Locans , Andreas Adelmann , Andreas Suter , Jannis Fischer , Werner Lustermann , Gunther Dissertori , Qiulin Wang

Accelerating the data acquisition of dynamic magnetic resonance imaging (MRI) leads to a challenging ill-posed inverse problem, which has received great interest from both the signal processing and machine learning community over the last…

Computer Vision and Pattern Recognition · Computer Science 2018-10-16 Chen Qin , Jo Schlemper , Jose Caballero , Anthony Price , Joseph V. Hajnal , Daniel Rueckert

Accelerating Magnetic Resonance Imaging (MRI) reduces scan time but often degrades image quality. While Implicit Neural Representations (INRs) show promise for MRI reconstruction, they struggle at high acceleration factors due to weak prior…

Computer Vision and Pattern Recognition · Computer Science 2025-08-12 Ziad Al-Haj Hemidi , Eytan Kats , Mattias P. Heinrich

Partial scan is a common approach to accelerate Magnetic Resonance Imaging (MRI) data acquisition in both 2D and 3D settings. However, accurately reconstructing images from partial scan data (i.e., incomplete k-space matrices) remains…

Image and Video Processing · Electrical Eng. & Systems 2023-06-06 Xiaohan Liu , Yanwei Pang , Xuebin Sun , Yiming Liu , Yonghong Hou , Zhenchang Wang , Xuelong Li

Acquisition of Magnetic Resonance Imaging (MRI) scans can be accelerated by under-sampling in k-space (i.e., the Fourier domain). In this paper, we consider the problem of optimizing the sub-sampling pattern in a data-driven fashion. Since…

Image and Video Processing · Electrical Eng. & Systems 2019-05-02 Cagla Deniz Bahadir , Adrian V. Dalca , Mert R. Sabuncu

Multi-dimensional non-Cartesian MRI encoding using the precomputed interpolator can encounter the curse of dimensionality, in which the interpolator size exceeds the available memory on the parallel accelerators. Here we reformulate the…

Medical Physics · Physics 2020-06-02 Jyh-Miin Lin , Grzegorz Kowalik , Jennifer A. Steeden , Vivek Muthurangu

Accelerated magnetic resonance (MR) scan acquisition with compressed sensing (CS) and parallel imaging is a powerful method to reduce MR imaging scan time. However, many reconstruction algorithms have high computational costs. To address…

Computer Vision and Pattern Recognition · Computer Science 2018-04-03 Dongwook Lee , Jaejun Yoo , Sungho Tak , Jong Chul Ye

Model-Based Iterative Reconstruction (MBIR) is important because direct methods, such as Filtered Back-Projection (FBP) can introduce significant noise and artifacts in sparse-angle tomography, especially for time-evolving samples. Although…

Mathematical Software · Computer Science 2026-03-31 Dinesh Kumar , Jeffrey Donatelli

Deep neural networks achieve state-of-the-art results for accelerated MRI reconstruction. Most research on deep learning based imaging focuses on improving neural network architectures trained and evaluated on fixed and homogeneous training…

Image and Video Processing · Electrical Eng. & Systems 2025-08-20 Kang Lin , Anselm Krainovic , Kun Wang , Reinhard Heckel

This paper presents a numerical study on a fast marching method based back projection reconstruction algorithm for photoacoustic tomography in heterogeneous media. Transcranial imaging is used here as a case study. To correct for the phase…

Medical Physics · Physics 2015-01-21 Tianren Wang , Yun Jing

Tensor computation has emerged as a powerful mathematical tool for solving high-dimensional and/or extreme-scale problems in science and engineering. The last decade has witnessed tremendous advancement of tensor computation and its…

Signal Processing · Electrical Eng. & Systems 2019-07-05 Kaiqi Zhang , Xiyuan Zhang , Zheng Zhang

Magnetic Resonance Imaging (MRI) has long been considered to be among "the gold standards" of diagnostic medical imaging. The long acquisition times, however, render MRI prone to motion artifacts, let alone their adverse contribution to the…

Image and Video Processing · Electrical Eng. & Systems 2021-04-14 Tomer Weiss , Ortal Senouf , Sanketh Vedula , Oleg Michailovich , Michael Zibulevsky , Alex Bronstein

Over the past decade, reflection matrix microscopy (RMM) and advanced image reconstruction algorithms have emerged to address the fundamental imaging depth limitations of optical microscopy in thick biological tissues and complex media. In…

Optics · Physics 2024-07-03 Sungsam Kang , Seokchan Yoon , Wonshik Choi

Physics-driven artificial intelligence (PD-AI) reconstruction methods have emerged as the state-of-the-art for accelerating MRI scans, enabling higher spatial and temporal resolutions. However, the high resolution of these scans generates…

Image and Video Processing · Electrical Eng. & Systems 2025-06-05 Yaşar Utku Alçalar , Yu Cao , Mehmet Akçakaya

Currently, the deep neural network is the mainstream for machine learning, and being actively developed for biomedical imaging applications with an increasing emphasis on tomographic reconstruction for MRI, CT, and other imaging modalities.…

Medical Physics · Physics 2018-05-31 Qing Lyu , Tao Xu , Hongming Shan , Ge Wang

Improving the image resolution and acquisition speed of magnetic resonance imaging (MRI) is a challenging problem. There are mainly two strategies dealing with the speed-resolution trade-off: (1) $k$-space undersampling with high-resolution…

Computer Vision and Pattern Recognition · Computer Science 2021-04-14 Wenqi Huang , Sen Jia , Ziwen Ke , Zhuo-Xu Cui , Jing Cheng , Yanjie Zhu , Dong Liang

Recommendation systems, social network analysis, medical imaging, and data mining often involve processing sparse high-dimensional data. Such high-dimensional data are naturally represented as tensors, and they cannot be efficiently…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-10-22 Weiyun Jiang , Kaiqi Zhang , Colin Yu Lin , Feng Xing , Zheng Zhang

Recent years have witnessed a rapid advancement in GPU technology, establishing it as a formidable high-performance parallel computing technology with superior floating-point computational capabilities compared to traditional CPUs. This…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-04-18 Xinyao Yi , Yuxin Qiao

Magnetic Resonance Imaging (MRI) is a non-invasive diagnostic and radiotherapy (RT) planning tool, offering detailed insights into the anatomy of the human body. The extensive scan time is stressful for patients, who must remain motionless…

Image and Video Processing · Electrical Eng. & Systems 2023-11-23 Shahinur Alam , Jinsoo Uh , Alexander Dresner , Chia-ho Hua , Khaled Khairy