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Related papers: Improved Circular $k$-Mismatch Sketches

200 papers

The Shortest Common Superstring problem (SCS) consists, for a set of strings S = {s_1,...,s_n}, in finding a minimum length string that contains all s_i, 1<= i <= n, as substrings. While a 2+11/30 approximation ratio algorithm has recently…

Data Structures and Algorithms · Computer Science 2018-05-02 Tristan Braquelaire , Marie Gasparoux , Mathieu Raffinot , Raluca Uricaru

We investigate the randomized and quantum communication complexity of the Hamming Distance problem, which is to determine if the Hamming distance between two n-bit strings is no less than a threshold d. We prove a quantum lower bound of…

Quantum Physics · Physics 2011-11-04 Wei Huang , Yaoyun Shi , Shengyu Zhang , Yufan Zhu

Analyzing patterns in data streams generated by network traffic, sensor networks, or satellite feeds is a challenge for systems in which the available storage is limited. In addition, real data is noisy, which makes designing data stream…

Data Structures and Algorithms · Computer Science 2017-11-15 Elena Grigorescu , Erfan Sadeqi Azer , Samson Zhou

We study the online variant of the language distance problem for two classical formal languages, the language of palindromes and the language of squares, and for the two most fundamental distances, the Hamming distance and the edit…

Data Structures and Algorithms · Computer Science 2024-05-01 Gabriel Bathie , Tomasz Kociumaka , Tatiana Starikovskaya

We study the problem of residual error estimation for matrix and vector norms using a linear sketch. Such estimates can be used, for example, to quickly assess how useful a more expensive low-rank approximation computation will be. The…

Data Structures and Algorithms · Computer Science 2024-08-19 Yi Li , Honghao Lin , David P. Woodruff

Sketch-and-project is a framework which unifies many known iterative methods for solving linear systems and their variants, as well as further extensions to non-linear optimization problems. It includes popular methods such as randomized…

Optimization and Control · Mathematics 2023-09-20 Michał Dereziński , Elizaveta Rebrova

To see is to sketch -- free-hand sketching naturally builds ties between human and machine vision. In this paper, we present a novel approach for translating an object photo to a sketch, mimicking the human sketching process. This is an…

Computer Vision and Pattern Recognition · Computer Science 2018-05-02 Jifei Song , Kaiyue Pang , Yi-Zhe Song , Tao Xiang , Timothy Hospedales

A Boolean maximum constraint satisfaction problem, Max-CSP($f$), is specified by a predicate $f:\{-1,1\}^k\to\{0,1\}$. An $n$-variable instance of Max-CSP($f$) consists of a list of constraints, each of which applies $f$ to $k$ distinct…

Data Structures and Algorithms · Computer Science 2023-04-14 Joanna Boyland , Michael Hwang , Tarun Prasad , Noah Singer , Santhoshini Velusamy

For an overdetermined system $\mathsf{A}\mathsf{x} \approx \mathsf{b}$ with $\mathsf{A}$ and $\mathsf{b}$ given, the least-square (LS) formulation $\min_x \, \|\mathsf{A}\mathsf{x}-\mathsf{b}\|_2$ is often used to find an acceptable…

Numerical Analysis · Mathematics 2020-06-04 Ke Chen , Qin Li , Kit Newton , Steve Wright

We study the problem of distinguishing between two symmetric probability distributions over $n$ bits by observing $k$ bits of a sample, subject to the constraint that all $k-1$-wise marginal distributions of the two distributions are…

Computational Complexity · Computer Science 2021-03-16 Christopher Williamson

Finding an Approximate Longest Common Substring (ALCS) within a given set $S=\{s_1,s_2,\ldots,s_m\}$ of $m \ge 2$ strings is a key problem in computational biology, such as identifying related mutations across multiple genetic sequences. We…

Data Structures and Algorithms · Computer Science 2025-09-22 Hamed Hasibi , Neerja Mhaskar , W. F. Smyth

We consider the problem of computing distance between a pattern of length $n$ and all $n$-length subwords of a text in the streaming model. In the streaming setting, only the Hamming distance ($L_0$) has been studied. It is known that…

Data Structures and Algorithms · Computer Science 2020-11-10 Tatiana Starikovskaya , Michal Svagerka , Przemysław Uznański

We study two basic problems regarding edit error, i.e. document exchange and error correcting codes for edit errors (insdel codes). For message length $n$ and edit error upper bound $k$, it is known that in both problems the optimal sketch…

Data Structures and Algorithms · Computer Science 2018-07-18 Kuan Cheng , Zhengzhong Jin , Xin Li , Ke Wu

We consider the following oblivious sketching problem: given $\epsilon \in (0,1/3)$ and $n \geq d/\epsilon^2$, design a distribution $\mathcal{D}$ over $\mathbb{R}^{k \times nd}$ and a function $f: \mathbb{R}^k \times \mathbb{R}^{nd}…

Data Structures and Algorithms · Computer Science 2022-02-22 Yi Li , David P. Woodruff

We give a sketching-based iterative algorithm that computes a $1+\varepsilon$ approximate solution for the ridge regression problem $\min_x \|Ax-b\|_2^2 +\lambda\|x\|_2^2$ where $A \in R^{n \times d}$ with $d \ge n$. Our algorithm, for a…

Data Structures and Algorithms · Computer Science 2022-06-20 Praneeth Kacham , David P. Woodruff

An outstanding open question posed by Guha and Indyk in 2006 asks to characterize metric spaces in which distances can be estimated using efficient sketches. Specifically, we say that a sketching algorithm is efficient if it achieves…

Data Structures and Algorithms · Computer Science 2017-02-16 Alexandr Andoni , Robert Krauthgamer , Ilya Razenshteyn

Given two strings of length $n$ over alphabet $\Sigma$, and an upper bound $k$ on their edit distance, the algorithm of Myers (Algorithmica'86) and Landau and Vishkin (JCSS'88) computes the unweighted string edit distance in…

Data Structures and Algorithms · Computer Science 2023-02-09 Debarati Das , Jacob Gilbert , MohammadTaghi Hajiaghayi , Tomasz Kociumaka , Barna Saha

In this paper, we investigate effective sketching schemes via sparsification for high dimensional multilinear arrays or tensors. More specifically, we propose a novel tensor sparsification algorithm that retains a subset of the entries of a…

Methodology · Statistics 2017-11-17 Dong Xia , Ming Yuan

We consider the problem of untangling a given (non-planar) straight-line circular drawing $\delta_G$ of an outerplanar graph $G=(V, E)$ into a planar straight-line circular drawing by shifting a minimum number of vertices to a new position…

Computational Geometry · Computer Science 2021-12-21 Sujoy Bhore , Guangping Li , Martin Nöllenburg , Ignaz Rutter , Hsiang-Yun Wu

Sketching algorithms have recently proven to be a powerful approach both for designing low-space streaming algorithms as well as fast polynomial time approximation schemes (PTAS). In this work, we develop new techniques to extend the…

Data Structures and Algorithms · Computer Science 2023-10-31 Gregory Dexter , Petros Drineas , David P. Woodruff , Taisuke Yasuda