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Non-negative matrix factorization (NMF) is an important technique for obtaining low dimensional representations of datasets. However, classical NMF does not take into account data that is collected at different times or in different…

Machine Learning · Computer Science 2023-11-21 James Chapman , Yotam Yaniv , Deanna Needell

We validate the use of matrix factorization for the automatic identification of relevant components from atomic pair distribution function (PDF) data. We also present a newly developed software infrastructure for analyzing the PDF data…

Non-negative matrix factorization (NMF) is a fundamental non-convex optimization problem with numerous applications in Machine Learning (music analysis, document clustering, speech-source separation etc). Despite having received extensive…

Machine Learning · Computer Science 2020-03-20 Ioannis Panageas , Stratis Skoulakis , Antonios Varvitsiotis , Xiao Wang

Missing link prediction is a method for network analysis, with applications in recommender systems, biology, social sciences, cybersecurity, information retrieval, and Artificial Intelligence (AI) reasoning in Knowledge Graphs. Missing link…

Machine Learning · Computer Science 2025-03-07 Ryan Barron , Maksim E. Eren , Duc P. Truong , Cynthia Matuszek , James Wendelberger , Mary F. Dorn , Boian Alexandrov

Mutational signatures are powerful summaries of the mutational processes altering the DNA of cancer cells. The usual approach to mutational signature analysis consists of decomposing the matrix of mutation counts from a sample of patients…

Methodology · Statistics 2026-02-17 Alessandro Zito , Giovanni Parmigiani , Jeffrey W. Miller

Nonnegative Matrix Factorization consists in (approximately) factorizing a nonnegative data matrix by the product of two low-rank nonnegative matrices. It has been successfully applied as a data analysis technique in numerous domains, e.g.,…

Optimization and Control · Mathematics 2012-08-13 Nicolas Gillis , François Glineur

Existing nonnegative matrix factorization methods focus on learning global structure of the data to construct basis and coefficient matrices, which ignores the local structure that commonly exists among data. In this paper, we propose a new…

Machine Learning · Computer Science 2019-07-10 Chong Peng , Zhao Kang , Chenglizhao Chen , Qiang Cheng

Neural collaborative filtering (NCF) and recurrent recommender systems (RRN) have been successful in modeling user-item relational data. However, they are also limited in their assumption of static or sequential modeling of relational data…

Machine Learning · Computer Science 2018-02-14 Xian Wu , Baoxu Shi , Yuxiao Dong , Chao Huang , Nitesh Chawla

Nonnegative matrix factorization (NMF) has been widely used to dimensionality reduction in machine learning. However, the traditional NMF does not properly handle outliers, so that it is sensitive to noise. In order to improve the…

Machine Learning · Computer Science 2022-06-08 Tingting Shen , Junhang Li , Can Tong , Qiang He , Chen Li , Yudong Yao , Yueyang Teng

Inthischapterwediscusshowtolearnanoptimalmanifoldpresentationto regularize nonegative matrix factorization (NMF) for data representation problems. NMF,whichtriestorepresentanonnegativedatamatrixasaproductoftwolowrank nonnegative matrices,…

Machine Learning · Computer Science 2014-10-09 Jim Jing-Yan Wang , Xin Gao

We consider the problem of regularized Poisson Non-negative Matrix Factorization (NMF) problem, encompassing various regularization terms such as Lipschitz and relatively smooth functions, alongside linear constraints. This problem holds…

Machine Learning · Computer Science 2024-04-26 Nathanaël Perraudin , Adrien Teutrie , Cécile Hébert , Guillaume Obozinski

Nonnegative matrix factorization (NMF) is a data analysis technique used in a great variety of applications such as text mining, image processing, hyperspectral data analysis, computational biology, and clustering. In this paper, we…

Optimization and Control · Mathematics 2012-08-13 Nicolas Gillis , François Glineur

In this work, we introduce a highly efficient algorithm to address the nonnegative matrix underapproximation (NMU) problem, i.e., nonnegative matrix factorization (NMF) with an additional underapproximation constraint. NMU results are…

Computer Vision and Pattern Recognition · Computer Science 2017-04-11 Mariano Tepper , Guillermo Sapiro

Non-negative matrix factorization (NMF) is a dimensionality reduction technique which tends to produce a sparse representation of data. Commonly, the error between the actual and recreated matrices is used as an objective function, but this…

Machine Learning · Computer Science 2019-02-06 Steven Squires , Adam Prugel Bennett , Mahesan Niranjan

Non-negative Matrix Factorization (NMF) is a key kernel for unsupervised dimension reduction used in a wide range of applications, including topic modeling, recommender systems and bioinformatics. Due to the compute-intensive nature of…

Machine Learning · Computer Science 2019-04-18 Gordon E. Moon , Aravind Sukumaran-Rajam , Srinivasan Parthasarathy , P. Sadayappan

Non-negative matrix factorization (NMF) is a matrix decomposition problem with applications in unsupervised learning. The general form of this problem (along with many of its variants) is NP-hard in nature. In our work, we explore how this…

In this paper we explore avenues for improving the reliability of dimensionality reduction methods such as Non-Negative Matrix Factorization (NMF) as interpretive exploratory data analysis tools. We first explore the difficulties of the…

Artificial Intelligence · Computer Science 2009-04-22 Nikolaos Vasiloglou , Alexander G. Gray , David V. Anderson

This paper investigates a non-negative matrix factorization (NMF)-based approach to the semi-supervised single-channel speech enhancement problem where only non-stationary additive noise signals are given. The proposed method relies on…

Sound · Computer Science 2013-09-25 Nikolay Lyubimov , Mikhail Kotov

Referring back to the original text in the course of hierarchical learning is a common human trait that ensures the right direction of learning. The models developed based on the concept of Non-negative Matrix Factorization (NMF), in this…

Machine Learning · Computer Science 2024-05-24 Prasun Dutta , Rajat K. De

In this paper, we propose a provably correct algorithm for convolutive nonnegative matrix factorization (CNMF) under separability assumptions. CNMF is a convolutive variant of nonnegative matrix factorization (NMF), which functions as an…

Machine Learning · Computer Science 2019-11-15 Anthony Degleris , Nicolas Gillis