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Using graph neural networks for large graphs is challenging since there is no clear way of constructing mini-batches. To solve this, previous methods have relied on sampling or graph clustering. While these approaches often lead to good…

Machine Learning · Computer Science 2022-12-20 Johannes Gasteiger , Chendi Qian , Stephan Günnemann

Graph embedding is a popular algorithmic approach for creating vector representations for individual vertices in networks. Training these algorithms at scale is important for creating embeddings that can be used for classification, ranking,…

Machine Learning · Computer Science 2019-07-04 C. Bayan Bruss , Anish Khazane , Jonathan Rider , Richard Serpe , Saurabh Nagrecha , Keegan E. Hines

A network can be analyzed at different topological scales, ranging from single nodes to motifs, communities, up to the complete structure. We propose a novel intermediate-level topological analysis that considers non-overlapping subgraphs…

Computational Physics · Physics 2009-11-13 Lucas Antiqueira , Luciano da Fontoura Costa

Commonsense question answering is a crucial task that requires machines to employ reasoning according to commonsense. Previous studies predominantly employ an extracting-and-modeling paradigm to harness the information in KG, which first…

Machine Learning · Computer Science 2024-11-12 Boci Peng , Yongchao Liu , Xiaohe Bo , Sheng Tian , Baokun Wang , Chuntao Hong , Yan Zhang

In this paper, we investigate the problem of evaluating Basic Graph Patterns (BGP, for short, a subclass of SPARQL queries) over dynamic Linked Data graphs; i.e., Linked Data graphs that are continuously updated. We consider a setting where…

Databases · Computer Science 2025-05-19 Manolis Gergatsoulis , Matthew Damigos

Biomedical Named Entity Recognition presents significant challenges due to the complexity of biomedical terminology and inconsistencies in annotation across datasets. This paper introduces SRU-NER (Slot-based Recurrent Unit NER), a novel…

Computation and Language · Computer Science 2025-07-25 João Ruano , Gonçalo M. Correia , Leonor Barreiros , Afonso Mendes

Graph neural networks (GNNs) fuel diverse machine learning tasks involving graph-structured data, ranging from predicting protein structures to serving personalized recommendations. Real-world graph data must often be stored distributed…

Machine Learning · Computer Science 2024-02-13 Aashish Kolluri , Sarthak Choudhary , Bryan Hooi , Prateek Saxena

Graph retrieval based on subgraph isomorphism has several real-world applications such as scene graph retrieval, molecular fingerprint detection and circuit design. Roy et al. [35] proposed IsoNet, a late interaction model for subgraph…

Machine Learning · Computer Science 2025-10-28 Ashwin Ramachandran , Vaibhav Raj , Indrayumna Roy , Soumen Chakrabarti , Abir De

Many machine learning algorithms have been developed under the assumption that data sets are already available in batch form. Yet in many application domains data is only available sequentially overtime via compute nodes in different…

Optimization and Control · Mathematics 2020-09-10 Alfredo Garcia , Luochao Wang , Jeff Huang , Lingzhou Hong

The in-memory graph layout or organization has a considerable impact on the time and energy efficiency of distributed memory graph computations. It affects memory locality, inter-task load balance, communication time, and overall memory…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-01-04 George M Slota , Sivasankaran Rajamanickam , Kamesh Madduri

This chapter studies the problem of traversing large graphs using the breadth-first search order on distributed-memory supercomputers. We consider both the traditional level-synchronous top-down algorithm as well as the recently discovered…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-05-15 Aydin Buluc , Scott Beamer , Kamesh Madduri , Krste Asanovic , David Patterson

We introduce a collaborative learning framework allowing multiple parties having different sets of attributes about the same user to jointly build models without exposing their raw data or model parameters. In particular, we propose a…

Machine Learning · Computer Science 2020-08-03 Yang Liu , Yan Kang , Xinwei Zhang , Liping Li , Yong Cheng , Tianjian Chen , Mingyi Hong , Qiang Yang

Federated learning is an emerging paradigm allowing large-scale decentralized learning without sharing data across different data owners, which helps address the concern of data privacy in medical image analysis. However, the requirement…

Image and Video Processing · Electrical Eng. & Systems 2023-05-26 Xuanang Xu , Hannah H. Deng , Jaime Gateno , Pingkun Yan

This work presents a novel modeling and analysis framework for graph sequences which addresses the challenge of detecting and contextualizing anomalies in labelled, streaming graph data. We introduce a generalization of the BTER model of…

Social and Information Networks · Computer Science 2015-04-21 Robert A. Bridges , John Collins , Erik M. Ferragut , Jason Laska , Blair D. Sullivan

Representation learning on graphs has been gaining attention due to its wide applicability in predicting missing links, and classifying and recommending nodes. Most embedding methods aim to preserve certain properties of the original graph…

Social and Information Networks · Computer Science 2019-09-13 Palash Goyal , Di Huang , Sujit Rokka Chhetri , Arquimedes Canedo , Jaya Shree , Evan Patterson

Motivated by the computational and storage challenges that dense embeddings pose, we introduce the problem of latent network summarization that aims to learn a compact, latent representation of the graph structure with dimensionality that…

Social and Information Networks · Computer Science 2019-06-24 Di Jin , Ryan Rossi , Danai Koutra , Eunyee Koh , Sungchul Kim , Anup Rao

Federated query engines allow data consumers to execute queries over the federation of Linked Data (LD). However, as federated queries are decomposed into potentially thousands of subqueries distributed among SPARQL endpoints, data…

Databases · Computer Science 2015-08-26 Georges Nassopoulos , Patricia Serrano-Alvarado , Pascal Molli , Emmanuel Desmontils

Graph-based methods are known to be successful in many machine learning and pattern classification tasks. These methods consider semi-structured data as graphs where nodes correspond to primitives (parts, interest points, segments, etc.)…

Computer Vision and Pattern Recognition · Computer Science 2018-03-02 Anjan Dutta , Hichem Sahbi

Feature extraction and dimension reduction for networks is critical in a wide variety of domains. Efficiently and accurately learning features for multiple graphs has important applications in statistical inference on graphs. We propose a…

Applications · Statistics 2021-06-23 Shangsi Wang , Jesús Arroyo , Joshua T. Vogelstein , Carey E. Priebe

This paper studies parametric bootstrap methods for network data, with the goal of quantifying the uncertainty of network statistics of interest. While existing network resampling methods primarily focus on count statistics under…

Methodology · Statistics 2026-05-29 Zhixuan Shao , Can M. Le