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The COVID-19 infection fatality rate (IFR) is the proportion of individuals infected with SARS-CoV-2 who subsequently die. As COVID-19 disproportionately affects older individuals, age-specific IFR estimates are imperative to facilitate…

Updating observations of a signal due to the delays in the measurement process is a common problem in signal processing, with prominent examples in a wide range of fields. An important example of this problem is the nowcasting of COVID-19…

The new Coronavirus (COVID-19) is an emerging disease responsible for infecting millions of people since the first notification until nowadays. Developing efficient short-term forecasting models allow knowing the number of future cases. In…

Populations and Evolution · Quantitative Biology 2020-07-27 Matheus Henrique Dal Molin Ribeiro , Ramon Gomes da Silva , Viviana Cocco Mariani , Leandro dos Santos Coelho

We collected individualized (unidentifiable) and aggregated openly available data from various sources related to suspected/confirmed SARS-CoV-2 infections, vaccinations, non-pharmaceutical government interventions, human mobility, and…

The world is suffering from a pandemic called COVID-19, caused by the SARS-CoV-2 virus. National governments have problems evaluating the reach of the epidemic, due to having limited resources and tests at their disposal. This problem is…

The Infection Fatality Rate (IFR) of COVID-19 is difficult to estimate because the number of infections is unknown and there is a lag between each infection and the potentially subsequent death. We introduce a new approach for estimating…

Computers and Society · Computer Science 2021-09-29 Naveen Pai , Sean Zhang , Mor Harchol-Balter

Knowing the infection fatality ratio (IFR) is of crucial importance for evidence-based epidemic management: for immediate planning; for balancing the life years saved against the life years lost due to the consequences of management; and…

Quantitative Methods · Quantitative Biology 2020-08-11 Simon N. Wood , Ernst C. Wit , Matteo Fasiolo , Peter J. Green

As the ravages caused by COVID-19 pandemic are becoming inevitable with every moment, monitoring and understanding of transmission and fatality rate has become even more paramount for containing its spread. The key purpose of this analysis…

Populations and Evolution · Quantitative Biology 2020-08-12 Fakhar Mustafa , Rehan Ahmed Khan Sherwani , Syed Salman Saqlain , Muhammad Asad Meraj , Haseeb ur Rehman , Rida Ayyaz

The outbreak of Coronavirus Disease 2019 (COVID-19) is an ongoing pandemic affecting over 200 countries and regions. Inference about the transmission dynamics of COVID-19 can provide important insights into the speed of disease spread and…

Methodology · Statistics 2020-07-06 Tianjian Zhou , Yuan Ji

We propose a stochastic SIR model, specified as a system of stochastic differential equations, to analyse the data of the Italian COVID-19 epidemic, taking also into account the under-detection of infected and recovered individuals in the…

Populations and Evolution · Quantitative Biology 2021-02-22 Sara Pasquali , Antonio Pievatolo , Antonella Bodini , Fabrizio Ruggeri

COVID-19 pandemic is an ongoing global pandemic which has caused unprecedented disruptions in the public health sector and global economy. The virus, SARS-CoV-2 is responsible for the rapid transmission of coronavirus disease. Due to its…

The number of Covid-19 cases is increasing dramatically worldwide. Therefore, the availability of reliable forecasts for the number of cases in the coming days is of fundamental importance. We propose a simple statistical method for…

In this paper, we use a Bayesian method to estimate the effective reproduction number (R(t)), in the context of monitoring the time evolution of the COVID-19 pandemic in Brazil at different geographic levels. The focus of this study is to…

Applications · Statistics 2023-06-05 Edson Porto da Silva , Antônio Marcus Nogueira Lima

There are many sources of data giving information about the number of SARS-CoV-2 infections in the population, but all have major drawbacks, including biases and delayed reporting. For example, the number of confirmed cases largely…

Applications · Statistics 2022-06-08 Nicholas J. Irons , Adrian E. Raftery

This manuscript proposes a model of $n$ distinct populations interaction structured SEIR to describe the spread of COVID-19 pandemic diseases. The proposed model has the flexibility to include geographically separated communities as well as…

Populations and Evolution · Quantitative Biology 2020-08-04 Matheus Jatkoske Lazo , Adriano De Cezaro

Susceptible-Invective-Recovered (SIR) mathematical models are in high demand due to the COVID-19 pandemic. They are used in their standard formulation, or through the many variants, trying to fit and hopefully predict the number of new…

Populations and Evolution · Quantitative Biology 2020-05-19 Ben-Hur Francisco Cardoso , Sebastián Gonçalves

In this paper, we firstly propose SQIARD and SIARD models to investigate the transmission of COVID-19 with quarantine, infected and asymptomatic infected, and discuss the relation between the respective basic reproduction number $R_0, R_Q$…

Populations and Evolution · Quantitative Biology 2021-06-15 Bo-Cyuan Lin , Yen-Jia Chen , Yi-Cheng Hung , Chun-sheng Chen , Han-Chun Wang , Jann-Long Chern

Understanding differences in hospital case-fatality rates (HCFRs) of coronavirus disease (COVID-19) may help evaluate its severity and the capacity of the healthcare system to reduce mortality. We examined the variability in HCFRs of…

When the novel coronavirus disease SARS-CoV2 (COVID-19) was officially declared a pandemic by the WHO in March 2020, the scientific community had already braced up in the effort of making sense of the fast-growing wealth of data gathered by…

Populations and Evolution · Quantitative Biology 2020-05-25 Timoteo Carletti , Duccio Fanelli , Francesco Piazza

The global COVID-19 pandemic (SARS-CoV-2 virus) is the defining health crisis of our century. Due to the absence of vaccines and drugs that can help to fight it, the world solution to control the spread has been to consider public social…

Populations and Evolution · Quantitative Biology 2020-05-22 Marcelo Menezes Morato , Saulo Benchimol Bastos , Daniel Oliveira Cajueiro , Julio Elias Normey-Rico