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Instance segmentation in 3D images is a fundamental task in biomedical image analysis. While deep learning models often work well for 2D instance segmentation, 3D instance segmentation still faces critical challenges, such as insufficient…

Computer Vision and Pattern Recognition · Computer Science 2018-07-02 Zhuo Zhao , Lin Yang , Hao Zheng , Ian H. Guldner , Siyuan Zhang , Danny Z. Chen

Image translation across domains for unpaired datasets has gained interest and great improvement lately. In medical imaging, there are multiple imaging modalities, with very different characteristics. Our goal is to use cross-modality…

Image and Video Processing · Electrical Eng. & Systems 2022-02-07 Leo Segre , Or Hirschorn , Dvir Ginzburg , Dan Raviv

Automatic segmentation of medical images is a key step for diagnostic and interventional tasks. However, achieving this requires large amounts of annotated volumes, which can be tedious and time-consuming task for expert annotators. In this…

The Segment Anything Model (SAM) has achieved a notable success in two-dimensional image segmentation in natural images. However, the substantial gap between medical and natural images hinders its direct application to medical image…

Computer Vision and Pattern Recognition · Computer Science 2024-04-17 Quan Quan , Fenghe Tang , Zikang Xu , Heqin Zhu , S. Kevin Zhou

There has been a significant increase from 2010 to 2016 in the number of people suffering from spine problems. The automatic image segmentation of the spine obtained from a computed tomography (CT) image is important for diagnosing spine…

Computer Vision and Pattern Recognition · Computer Science 2017-12-06 Malinda Vania , Dawit Mureja , Deukhee Lee

Annotating lots of 3D medical images for training segmentation models is time-consuming. The goal of weakly supervised semantic segmentation is to train segmentation models without using any ground truth segmentation masks. Our work…

Image and Video Processing · Electrical Eng. & Systems 2024-04-23 Marius Schmidt-Mengin , Alexis Benichoux , Shibeshih Belachew , Nikos Komodakis , Nikos Paragios

Purpose: To implement a brain segmentation pipeline based on convolutional neural networks, which rapidly segments 3D volumes into 27 anatomical structures. To provide an extensive, comparative study of segmentation performance on various…

Image and Video Processing · Electrical Eng. & Systems 2020-08-12 Jonathan Zopes , Moritz Platscher , Silvio Paganucci , Christian Federau

Volume denoising is a foundational problem in computational imaging, as many 3D imaging inverse problems face high levels of measurement noise. Inspired by the strong 2D image denoising properties of Field of Junctions (ICCV 2021), we…

Computer Vision and Pattern Recognition · Computer Science 2026-03-03 Namhoon Kim , Narges Moeini , Justin Romberg , Sara Fridovich-Keil

In this work we present a method of automatic segmentation of defective skulls for custom cranial implant design and 3D printing purposes. Since such tissue models are usually required in patient cases with complex anatomical defects and…

Image and Video Processing · Electrical Eng. & Systems 2020-11-05 Oldřich Kodym , Michal Španěl , Adam Herout

Due to the inherent ill-posed nature of 2D-3D projection, monocular 3D object detection lacks accurate depth recovery ability. Although the deep neural network (DNN) enables monocular depth-sensing from high-level learned features, the…

Computer Vision and Pattern Recognition · Computer Science 2022-03-17 Qing Lian , Peiliang Li , Xiaozhi Chen

Fueled by recent advances in machine learning, there has been tremendous progress in the field of semantic segmentation for the medical image computing community. However, developed algorithms are often optimized and validated by hand based…

Image and Video Processing · Electrical Eng. & Systems 2020-05-21 Oliver Rippel , Leon Weninger , Dorit Merhof

Segmentation is often an essential intermediate step in image analysis. A volume segmentation characterizes the underlying volume image in terms of geometric information--segments, faces between segments, curves in which several faces…

Computational Geometry · Computer Science 2010-10-01 Bjoern Andres , Ullrich Koethe , Thorben Kroeger , Fred A. Hamprecht

Accurately segmenting left atrium in MR volume can benefit the ablation procedure of atrial fibrillation. Traditional automated solutions often fail in relieving experts from the labor-intensive manual labeling. In this paper, we propose a…

Computer Vision and Pattern Recognition · Computer Science 2018-12-17 Cheng Bian , Xin Yang , Jianqiang Ma , Shen Zheng , Yu-An Liu , Reza Nezafat , Pheng-Ann Heng , Yefeng Zheng

For compression fracture detection and evaluation, an automatic X-ray image segmentation technique that combines deep-learning and level-set methods is proposed. Automatic segmentation is much more difficult for X-ray images than for CT or…

Medical Physics · Physics 2019-04-17 Kang Cheol Kim , Hyun Cheol Cho , Tae Jun Jang , Jong Mun Choi , Jin Keun Seo

Cone beam computed tomography (CBCT) is a common way of diagnosing dental related diseases. Accurate segmentation of 3D tooth is of importance for the treatment. Although deep learning based methods have achieved convincing results in…

Computer Vision and Pattern Recognition · Computer Science 2024-07-16 Chunshi Wang , Bin Zhao , Shuxue Ding

3D part segmentation is still an open problem in the field of 3D vision and AR/VR. Due to limited 3D labeled data, traditional supervised segmentation methods fall short in generalizing to unseen shapes and categories. Recently, the…

Computer Vision and Pattern Recognition · Computer Science 2025-02-28 Keito Suzuki , Bang Du , Girish Krishnan , Kunyao Chen , Runfa Blark Li , Truong Nguyen

Automated detection of curvilinear structures, e.g., blood vessels or nerve fibres, from medical and biomedical images is a crucial early step in automatic image interpretation associated to the management of many diseases. Precise…

Image and Video Processing · Electrical Eng. & Systems 2020-10-20 Lei Mou , Yitian Zhao , Huazhu Fu , Yonghuai Liu , Jun Cheng , Yalin Zheng , Pan Su , Jianlong Yang , Li Chen , Alejandro F Frang , Masahiro Akiba , Jiang Liu

Deep convolutional neural networks (CNNs) are state-of-the-art for semantic image segmentation, but typically require many labeled training samples. Obtaining 3D segmentations of medical images for supervised training is difficult and labor…

Computer Vision and Pattern Recognition · Computer Science 2019-07-29 Zhenlin Xu , Marc Niethammer

Spinal surgery planning necessitates automatic segmentation of vertebrae in cone-beam computed tomography (CBCT), an intraoperative imaging modality that is widely used in intervention. However, CBCT images are of low-quality and…

Image and Video Processing · Electrical Eng. & Systems 2021-03-10 Yuanyuan Lyu , Haofu Liao , Heqin Zhu , S. Kevin Zhou

CT organ segmentation on computed tomography (CT) images becomes a significant brick for modern medical image analysis, supporting clinic workflows in multiple domains. Previous segmentation methods include 2D convolution neural networks…

Image and Video Processing · Electrical Eng. & Systems 2022-04-19 Haoyu Fang , Yi Fang , Xiaofeng Yang
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