Related papers: Students Need More Attention: BERT-based Attention…
The massive scale and growth of textual biomedical data have made its indexing and classification increasingly important. However, existing research on this topic mainly utilized convolutional and recurrent neural networks, which generally…
Fine-tuned Bidirectional Encoder Representations from Transformers (BERT)-based sequence classification models have proven to be effective for detecting Alzheimer's Disease (AD) from transcripts of human speech. However, previous research…
In recent years BERT shows apparent advantages and great potential in natural language processing tasks. However, both training and applying BERT requires intensive time and resources for computing contextual language representations, which…
Biomedical literature is a rapidly expanding field of science and technology. Classification of biomedical texts is an essential part of biomedicine research, especially in the field of biology. This work proposes the fine-tuned DistilBERT,…
In recent years, the introduction of the Transformer models sparked a revolution in natural language processing (NLP). BERT was one of the first text encoders using only the attention mechanism without any recurrent parts to achieve…
The Bidirectional Encoder Representations from Transformers (BERT) model has been radically improving the performance of many Natural Language Processing (NLP) tasks such as Text Classification and Named Entity Recognition (NER)…
We present BlockBERT, a lightweight and efficient BERT model for better modeling long-distance dependencies. Our model extends BERT by introducing sparse block structures into the attention matrix to reduce both memory consumption and…
Machine based text comprehension has always been a significant research field in natural language processing. Once a full understanding of the text context and semantics is achieved, a deep learning model can be trained to solve a large…
This paper conducts a comprehensive investigation into applying large language models, particularly on BioBERT, in healthcare. It begins with thoroughly examining previous natural language processing (NLP) approaches in healthcare, shedding…
Models based on BERT have been extremely successful in solving a variety of natural language processing (NLP) tasks. Unfortunately, many of these large models require a great deal of computational resources and/or time for pre-training and…
In this paper, we propose Stacked DeBERT, short for Stacked Denoising Bidirectional Encoder Representations from Transformers. This novel model improves robustness in incomplete data, when compared to existing systems, by designing a novel…
Online patient inquiries are often informal, incomplete, and written before professional assessment, yet they must still be routed to an appropriate level of clinical follow-up. We study this as a four-class actionable triage task --…
We investigate the self-attention mechanism of BERT in a fine-tuning scenario for the classification of scientific articles over a taxonomy of research disciplines. We observe how self-attention focuses on words that are highly related to…
Deep learning (DL) based predictive models from electronic health records (EHR) deliver impressive performance in many clinical tasks. Large training cohorts, however, are often required to achieve high accuracy, hindering the adoption of…
Efficient text classification is essential for handling the increasing volume of academic publications. This study explores the use of pre-trained language models (PLMs), including BERT, SciBERT, BioBERT, and BlueBERT, fine-tuned on the Web…
Text classification problem is a very broad field of study in the field of natural language processing. In short, the text classification problem is to determine which of the previously determined classes the given text belongs to.…
Electronic Health Records are large repositories of valuable clinical data, with a significant portion stored in unstructured text format. This textual data includes clinical events (e.g., disorders, symptoms, findings, medications and…
Semantic parsing is the task of transforming sentences from natural language into formal representations of predicate-argument structures. Under this research area, frame-semantic parsing has attracted much interest. This parsing approach…
This paper presents a novel approach to accurately classify the hallmarks of cancer, which is a crucial task in cancer research. Our proposed method utilizes the Bidirectional Encoder Representations from Transformers (BERT) architecture,…
Recent developments in online communication and their usage in everyday life have caused an explosion in the amount of a new genre of text data, short text. Thus, the need to classify this type of text based on its content has a significant…