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We consider different notions of equivalence for Morse functions on the sphere in the context of persistent homology, and introduce new invariants to study these equivalence classes. These new invariants are as simple, but more discerning…

A suitable feature representation that can both preserve the data intrinsic information and reduce data complexity and dimensionality is key to the performance of machine learning models. Deeply rooted in algebraic topology, persistent…

Algebraic Topology · Mathematics 2018-11-02 Chi Seng Pun , Kelin Xia , Si Xian Lee

Persistence diagrams are one of the main tools in the field of Topological Data Analysis (TDA). They contain fruitful information about the shape of data. The use of machine learning algorithms on the space of persistence diagrams proves to…

Computational Geometry · Computer Science 2021-08-10 Yu-Min Chung , Austin Lawson

One of the primary areas of interest in applied algebraic topology is persistent homology, and, more specifically, the persistence diagram. Persistence diagrams have also become objects of interest in topological data analysis. However,…

Methodology · Statistics 2018-04-06 Eric Berry , Yen-Chi Chen , Jessi Cisewski-Kehe , Brittany Terese Fasy

Topological Data Analysis (TDA) combines computational topology and data science to extract and analyze intrinsic topological and geometric structures in data set in a metric space. While the persistent homology (PH), a widely used tool in…

Computational Geometry · Computer Science 2025-04-15 Chuanshen Hu , Yu Wang , Kelin Xia , Ke Ye , Yipeng Zhang

The stability theorem for persistent homology is a central result in topological data analysis. While the original formulation of the result concerns the persistence barcodes of $\mathbb{R}$-valued functions, the result was later cast in a…

Algebraic Topology · Mathematics 2018-10-24 Magnus Bakke Botnan , Michael Lesnick

Persistent homology is a powerful tool for characterizing the topology of a data set at various geometric scales. When applied to the description of molecular structures, persistent homology can capture the multiscale geometric features and…

Quantitative Methods · Quantitative Biology 2018-07-31 Zixuan Cang , Guo-Wei Wei

We study the topological persistence of the (path) configuration spaces and the (path) independence complexes for digraphs as well as their underlying graphs. We construct some canonical embeddings from the (path) independence complexes of…

Combinatorics · Mathematics 2025-09-08 Shiquan Ren

In graph learning, maps between graphs and their subgraphs frequently arise. For instance, when coarsening or rewiring operations are present along the pipeline, one needs to keep track of the corresponding nodes between the original and…

Machine Learning · Computer Science 2023-02-01 Marco Pegoraro , Riccardo Marin , Arianna Rampini , Simone Melzi , Luca Cosmo , Emanuele Rodolà

To compute the persistent homology of a grayscale digital image one needs to build a simplicial or cubical complex from it. For cubical complexes, the two commonly used constructions (corresponding to direct and indirect digital…

Algebraic Topology · Mathematics 2024-08-26 Bea Bleile , Adélie Garin , Teresa Heiss , Kelly Maggs , Vanessa Robins

The concept of topological persistence, introduced recently in computational topology, finds applications in studying a map in relation to the topology of its domain. Since its introduction, it has been extended and generalized in various…

Algebraic Topology · Mathematics 2015-03-17 Dan Burghelea , Tamal K. Dey , Du Dong

Geometric data augmentation is widely used in segmentation workflows, but polygon annotations are often assumed to remain valid after transformation. This assumption can fail in structured domains such as architectural floorplan analysis,…

Computer Vision and Pattern Recognition · Computer Science 2026-05-18 Sudip Laudari , Sang Hun Baek

Persistence homology is a tool used to measure topological features that are present in data sets and functions. Persistence pairs births and deaths of these features as we iterate through the sublevel sets of the data or function of…

Computational Geometry · Computer Science 2010-02-10 Brittany Terese Fasy

Topological data analysis leverages topological features to analyze datasets, with applications in diverse fields like medical sciences and biology. A key tool of this theory is the persistence diagram, which encodes topological information…

Algebraic Topology · Mathematics 2024-10-22 Michael Etienne Van Huffel , Olympio Hacquard , Vadim Lebovici , Matteo Palo

Persistent homology has been widely used to discover hidden topological structures in data across various applications, including music data. To apply persistent homology, a distance or metric must be defined between points in a point cloud…

Sound · Computer Science 2025-12-15 Eunwoo Heo , Byeongchan Choi , Myung ock Kim , Mai Lan Tran , Jae-Hun Jung

Machine learning for point clouds has been attracting much attention, with many applications in various fields, such as shape recognition and material science. For enhancing the accuracy of such machine learning methods, it is often…

Machine Learning · Computer Science 2023-12-29 Naoki Nishikawa , Yuichi Ike , Kenji Yamanishi

In this paper we present a new approach to computing homology (with field coefficients) and persistent homology. We use concepts from discrete Morse theory, to provide an algorithm which can be expressed solely in terms of simple graph…

Algebraic Topology · Mathematics 2012-10-26 Paweł Dłotko , Hubert Wagner

Connection matrices are a generalization of Morse boundary operators from the classical Morse theory for gradient vector fields. Developing an efficient computational framework for connection matrices is particularly important in the…

Algebraic Topology · Mathematics 2023-09-26 Tamal K. Dey , Michał Lipiński , Marian Mrozek , Ryan Slechta

We present a unified pipeline for univariate time series classification via complex networks and persistent homology. A time series is mapped to a graph through one of five constructions across three families (visibility (natural and…

Algebraic Topology · Mathematics 2026-05-05 İsmail Güzel

The subject of persistent homology has vitalized applications of algebraic topology to point cloud data and to application fields far outside the realm of pure mathematics. The area has seen several fundamentally important results that are…

Algebraic Topology · Mathematics 2013-11-12 Mikael Vejdemo-Johansson
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