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Markov State Models (MSMs) are a powerful framework to reproduce the long-time conformational dynamics of biomolecules using a set of short Molecular Dynamics (MD) simulations. However, precise kinetics predictions of MSMs heavily rely on…

Biomolecules · Quantitative Biology 2018-06-27 Qihua Chen , Jiangyan Feng , Shriyaa Mittal , Diwakar Shukla

Genetic algorithm (GA) is typically used to solve nonlinear model predictive control's optimization problem. However, the size of the search space in which the GA searches for the optimal control inputs is crucial for its applicability to…

Optimization and Control · Mathematics 2025-01-22 Eslam Mostafa , Hussein A. Aly , Ahmed Elliethy

The method and the advantages of an evolutionary computing based approach using a steady state genetic algorithm (GA) for the parameterization of interatomic potentials for metal oxides within the shell model framework are developed and…

Materials Science · Physics 2013-06-06 Jose Solomon , Peter Chung , Deepak Srivastava , Eric Darve

This paper presents a genetic-based hybrid algorithm that combines the exploration power of Genetic Algorithm (GA) with the exploitation capacity of a phenotypical probabilistic local search algorithm. Though not limited to a certain class…

Optimization and Control · Mathematics 2016-11-26 Reza Najian Asl , Mohamad Aslani , Masoud Shariat Panahi

Genetic Algorithm (GA) has been used in this paper for a new Nyquist based sub-optimal model reduction and optimal time domain tuning of PID and fractional order (FO) PI{\lambda}D{\mu} controllers. Comparative studies show that the new…

Systems and Control · Computer Science 2012-02-28 Saptarshi Das , Indranil Pan , Shantanu Das , Amitava Gupta

The Genetic Algorithm is a heuristic that can be used to produce model independent solutions to an optimization problem, thus making it ideal for use in cosmology and more specifically in the analysis of type Ia supernovae data. In this…

Cosmology and Nongalactic Astrophysics · Physics 2011-03-18 Savvas Nesseris

The calibration of solid constitutive models with full-field experimental data is a long-standing challenge, especially in materials which undergo large deformation. In this paper, we propose a physics-informed deep-learning framework for…

Machine Learning · Computer Science 2022-04-01 Craig M. Hamel , Kevin N. Long , Sharlotte L. B. Kramer

We introduce a Genetic Algorithm (GA) based, open-source project to solve multi-objective optimization problems of materials characterization data analysis including EXAFS, XPS and nanoindentation. The modular design and multiple crossover…

Neural and Evolutionary Computing · Computer Science 2022-03-22 Miu Lun Lau , Min Long , Jeff Terry

In general, we can not use algebraic or enumerative methods to optimize a quality control (QC) procedure so as to detect the critical random and systematic analytical errors with stated probabilities, while the probability for false…

Neural and Evolutionary Computing · Computer Science 2018-12-03 Aristides T. Hatjimihail , Theophanes T. Hatjimihail

This paper proposes a new approach for the calibration of material parameters in local elastoplastic constitutive models. The calibration is posed as a constrained optimization problem, where the constitutive model evolution equations for a…

Computational Engineering, Finance, and Science · Computer Science 2025-05-09 Ryan Yan , D. Thomas Seidl , Reese E. Jones , Panayiotis Papadopoulos

Solving Quadratic equation is one of the intrinsic interests as it is the simplest nonlinear equations. A novel approach for solving Quadratic Equation based on Genetic Algorithms (GAs) is presented. Genetic Algorithms (GAs) are a technique…

Neural and Evolutionary Computing · Computer Science 2013-06-20 Tanistha Nayak , Tirtharaj Dash

Thin-film solar cells are predominately designed similar to a stacked structure. Optimizing the layer thicknesses in this stack structure is crucial to extract the best efficiency of the solar cell. The commonplace method used in…

Neural and Evolutionary Computing · Computer Science 2020-04-08 Premkumar Vincent , Gwenaelle Cunha Sergio , Jaewon Jang , In Man Kang , Jaehoon Park , Hyeok Kim , Minho Lee , Jin-Hyuk Bae

In genetical genomics studies, it is important to jointly analyze gene expression data and genetic variants in exploring their associations with complex traits, where the dimensionality of gene expressions and genetic variants can both be…

Methodology · Statistics 2014-04-15 Wei Lin , Rui Feng , Hongzhe Li

In this paper, we develop a convolutional neural network model to predict the mechanical properties of a two-dimensional checkerboard composite quantitatively. The checkerboard composite possesses two phases, one phase is soft and ductile…

Machine Learning · Computer Science 2020-02-03 Diab W. Abueidda , Mohammad Almasri , Rami Ammourah , Umberto Ravaioli , Iwona M. Jasiuk , Nahil A. Sobh

The string theory landscape may include a multitude of ultraviolet embeddings of the Standard Model, but identifying these has proven difficult due to the enormous number of available string compactifications. Genetic Algorithms (GAs)…

High Energy Physics - Theory · Physics 2023-06-07 Steve Abel , Andrei Constantin , Thomas R. Harvey , Andre Lukas , Luca A. Nutricati

In material science, models are derived to predict emergent material properties (e.g. elasticity, strength, conductivity) and their relations to processing conditions. A major drawback is the calibration of model parameters that depend on…

Neural and Evolutionary Computing · Computer Science 2021-11-22 Gabriel Kronberger , Evgeniya Kabliman , Johannes Kronsteiner , Michael Kommenda

The protoplanetary discs of T Tauri and Herbig Ae/Be stars have been studied by using geometric disc models to fit their spectral energy distribution (SED). The simulations provide means to reproduce the signatures of different…

Astrophysics · Physics 2009-11-13 A. Hetem , J. Gregorio-Hetem

The calibration of CALPHAD (CALculation of PHAse Diagrams) models involves the solution of a very challenging high-dimensional multiobjective optimization problem. Traditional approaches to parameter fitting predominantly rely on…

Materials Science · Physics 2025-05-06 Courtney Kunselman , Brandon Bocklund , Richard Otis , Raymundo Arroyave

This paper brings an in detail Genetic Algorithm (GA) based combinatorial optimization method used for the optimal design of the water distribution network (WDN) of Gurudeniya Service Zone, Sri Lanka. Genetic Algorithm (GA) mimics the…

Neural and Evolutionary Computing · Computer Science 2026-01-16 K. H. M. R. N. Senavirathna , C. K. Walgampaya

There is an abundance of prior research on the optimization of production systems, but there is a research gap when it comes to optimizing which components should be included in a design, and how they should be connected. To overcome this…

Neural and Evolutionary Computing · Computer Science 2024-02-05 N. Paape , J. A. W. M. van Eekelen , M. A. Reniers