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In this paper, we introduce a new approach for drawing diagrams that have applications in software visualization. Our approach is to use a technique we call confluent drawing for visualizing non-planar diagrams in a planar way. This…

Computational Geometry · Computer Science 2007-05-23 Matthew Dickerson , David Eppstein , Michael T. Goodrich , Jeremy Meng

Graphs are used to represent and analyze data in domains as diverse as physics, biology, chemistry, planetary science, and the social sciences. Across domains, random graph models relate generative processes to expected graph properties,…

Physics and Society · Physics 2025-09-12 Cole Mathis , Harrison B. Smith

It is well known that Drug Design is often a costly process both in terms of time and economic effort. While good Quantitative Structure-Activity Relationship models (QSAR) can help predicting molecular properties without the need to…

Biomolecules · Quantitative Biology 2022-02-14 Dylan Savoia , Alessio Ragno , Roberto Capobianco

The behavior of complex systems is determined not only by the topological organization of their interconnections but also by the dynamical processes taking place among their constituents. A faithful modeling of the dynamics is essential…

Physics and Society · Physics 2015-05-20 R. Lambiotte , R. Sinatra , J. -C. Delvenne , T. S. Evans , M. Barahona , V. Latora

Interacting systems are prevalent in nature. It is challenging to accurately predict the dynamics of the system if its constituent components are analyzed independently. We develop a graph-based model that unveils the systemic interactions…

Machine Learning · Computer Science 2024-10-31 Giangiacomo Mercatali , Andre Freitas , Jie Chen

The framework of causal models provides a principled approach to causal reasoning, applied today across many scientific domains. Here we present this framework in the language of string diagrams, interpreted formally using category theory.…

Logic in Computer Science · Computer Science 2023-04-18 Robin Lorenz , Sean Tull

The analytical description of charts is an exciting and important research area with many applications in academia and industry. Yet, this challenging task has received limited attention from the computational linguistics research…

Computation and Language · Computer Science 2021-08-18 Jiawen Zhu , Jinye Ran , Roy Ka-wei Lee , Kenny Choo , Zhi Li

Graphs are ubiquitous in encoding relational information of real-world objects in many domains. Graph generation, whose purpose is to generate new graphs from a distribution similar to the observed graphs, has received increasing attention…

Machine Learning · Computer Science 2022-12-08 Yanqiao Zhu , Yuanqi Du , Yinkai Wang , Yichen Xu , Jieyu Zhang , Qiang Liu , Shu Wu

Graphs are important data representations for describing objects and their relationships, which appear in a wide diversity of real-world scenarios. As one of a critical problem in this area, graph generation considers learning the…

Machine Learning · Computer Science 2022-10-06 Xiaojie Guo , Liang Zhao

Generating safety-critical scenarios, which are crucial yet difficult to collect, provides an effective way to evaluate the robustness of autonomous driving systems. However, the diversity of scenarios and efficiency of generation methods…

Computer Vision and Pattern Recognition · Computer Science 2023-08-22 Wenhao Ding , Haohong Lin , Bo Li , Ding Zhao

Graphical models can represent a multivariate distribution in a convenient and accessible form as a graph. Causal models can be viewed as a special class of graphical models that not only represent the distribution of the observed system…

Methodology · Statistics 2017-06-29 Christina Heinze-Deml , Marloes H. Maathuis , Nicolai Meinshausen

The explosion of data available in life sciences is fueling an increasing demand for expressive models and computational methods. Graph transformation is a model for dynamic systems with a large variety of applications. We introduce a novel…

This paper presents a novel approach to generate a use case diagram by analyzing the given user story using NLP and ML. Use case diagrams play a major role in the designing phase of the SDLC. This proves the fact that automating the use…

We explore developing rich semantic models of systems. Specifically, we consider structured causal explanations about state changes in those systems. Essentially, we are developing process-based dynamic knowledge graphs. As an example, we…

Digital Libraries · Computer Science 2023-11-21 Robert B. Allen

Graphs are expressive abstractions representing more effectively relationships in data and enabling data science tasks. They are also a widely adopted paradigm in causal inference focusing on causal directed acyclic graphs. Causal DAGs…

Databases · Computer Science 2024-12-19 Amedeo Pachera , Mattia Palmiotto , Angela Bonifati , Andrea Mauri

One of the most difficult aspects of modeling complex dilemmas in decision-analytic terms is composing a diagram of relevance relations from a set of domain concepts. Decision models in domains such as medicine, however, exhibit certain…

Artificial Intelligence · Computer Science 2013-03-08 John W. Egar , Mark A. Musen

Graph data structures are fundamental for studying connected entities. With an increase in the number of applications where data is represented as graphs, the problem of graph generation has recently become a hot topic. However, despite its…

Graphs may be used to represent many different problem domains -- a concrete example is that of detecting communities in social networks, which are represented as graphs. With big data and more sophisticated applications becoming widespread…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-04-03 Miguel E. Coimbra , Alexandre P. Francisco , Luis Veiga

Motivated by deep learning regimes with multiple interacting yet distinct model components, we introduce learning diagrams, graphical depictions of training setups that capture parameterized learning as data rather than code. A learning…

Machine Learning · Computer Science 2025-01-06 Mason Lary , Richard Samuelson , Alexander Wilentz , Alina Zare , Matthew Klawonn , James P. Fairbanks

In the fundamental statistics course, students are taught to remember the well-known saying: "Correlation is not Causation". Till now, statistics (i.e., correlation) have developed various successful frameworks, such as Transformer and…

Artificial Intelligence · Computer Science 2023-11-22 Ning Xu , Yifei Gao , Hongshuo Tian , Yongdong Zhang , An-An Liu