Related papers: PESummary: the code agnostic Parameter Estimation …
www.processmining-software.com is a dedicated website for process mining software comparison and was developed to give practitioners and researchers an overview of commercial tools available on the market. Based on literature review and…
Reproducibility and reusability of the results of data-based modeling studies are essential. Yet, there has been -- so far -- no broadly supported format for the specification of parameter estimation problems in systems biology. Here, we…
We present the open source Astrophysical Multi-purpose Software Environment (AMUSE, www.amusecode.org), a component library for performing astrophysical simulations involving different physical domains and scales. It couples existing codes…
The Python Sky Model (PySM) is a Python package used by Cosmic Microwave Background (CMB) experiments to simulate maps, in HEALPix pixelization, of the various diffuse astrophysical components of Galactic emission relevant at CMB…
Condensed matter compounds typically form crystals, which break the rotational and translational invariance of space but remain invariant under a discrete set of symmetry operations. Understanding the effects allowed by this symmetry…
This paper summarizes and presents PulsatioMech: an open-source MATLAB toolbox for seismocardiography (SCG) signal processing. The toolbox may be found here: https://github.com/nzavanelli/SCG_master_toolbox PulsatioMech is currently under…
Synthesizer is a fast, flexible, modular, and extensible Python package that empowers astronomers to turn theoretical galaxy models into realistic synthetic observations - including spectra, photometry, images, and spectral cubes - with a…
Over the last few years, with the growth of time-series collecting and storing, there has been a great demand for tools and software for temporal data engineering and modeling. This paper presents a generic workflow for time series data…
One of the first steps to perform most of the software maintenance activities, such as updating features or fixing bugs, is to have a relatively good understanding of the program's source code which is often written by other developers. A…
Software metrics capture information about software development processes and products. These metrics support decision-making, e.g., in team management or dependency selection. However, existing metrics tools measure only a snapshot of a…
$clustertools$ is a Python package for analyzing star cluster simulations. The package is built around the $StarCluster$ class, which stores all data read in from the snapshot of a given model star cluster. The package contains functions…
PAWS is a tool to analyse the behaviour of weighted automata and conditional transition systems. At its core PAWS is based on a generic implementation of algorithms for checking language equivalence in weighted automata and bisimulation in…
Simulation ensembles are a common tool in physics for understanding how a model outcome depends on input parameters. We analyze an active particle system, where each particle can use energy from its surroundings to propel itself. A…
multisphere is an open-source Python package for generating multi-sphere representations of complex particles for use in DEM simulations. It reconstructs triangulated surface meshes and voxelized volumes as sets of intersecting spheres and…
EOSpython is a PyPI published Python package that encompass everything within a centralized earth observation satellite scheduling system in terms of customer database setup, scenario generation, pre-processing, problem setup, scheduling…
We introduce BSMArt, a python program for the exploration of parameter spaces of theories Beyond the Standard Model. Especially designed for use with the SARAH family of tools, it is also sufficiently flexible to be used with a wide variety…
We present the first automated multimodal summary generation system, MMSummary, for medical imaging video, particularly with a focus on fetal ultrasound analysis. Imitating the examination process performed by a human sonographer, MMSummary…
In the era of gravitational-wave astronomy, general-relativistic simulations of compact objects play a role of paramount importance. These calculations can be performed with the Einstein Toolkit, an open-source and community-supported…
In 2011, einsum was introduced to NumPy as a practical and convenient notation for tensor expressions in machine learning, quantum circuit simulation, and other fields. It has since been implemented in additional Python frameworks such as…
We present a convenient, all-in-one framework for the scientific analysis of fully reduced, (integral-field) spectroscopic data. The GIST pipeline (Galaxy IFU Spectroscopy Tool) is entirely written in Python3 and conducts all steps from the…