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In this work we present a formalism to describe non equilibrium conditions in systems with a discretized energy spectrum, such as quantum systems. We develop a formalism based on a combination of Gibbs-Shannon entropy and information…

Statistical Mechanics · Physics 2013-07-23 Alessio Gagliardi , Alessandro Pecchia , Aldo Di Carlo

We briefly review the recently developed, Markov process based isothermal chemical thermodynamics for nonlinear, driven mesoscopic kinetic systems. Both the instantaneous Shannon entropy {\boldmath $S[p_{\alpha}(t)]$} and relative entropy…

Statistical Mechanics · Physics 2017-01-10 David B. Saakian , Hong Qian

In the real world, one almost never knows the parameters of a thermodynamic process to infinite precision. Reflecting this, here we investigate how to extend stochastic thermodynamics to systems with uncertain parameters, including…

Statistical Mechanics · Physics 2021-03-17 Jan Korbel , David H. Wolpert

In this work we investigate the convergence to equilibrium for mass action reaction-diffusion systems which model irreversible enzyme reactions. Using the standard entropy method in this situation is not feasible as the irreversibility of…

Analysis of PDEs · Mathematics 2022-03-14 Marcel Braukhoff , Amit Einav , Bao Quoc Tang

This article extends the single-fluid relativistic irreversible thermodynamics theory of {\it M{\"u}ller}, {\it Israel} and {\it Stewart} (hereafter the {MIS} theory) to a multi-fluid system with inherent species interactions. This is…

General Relativity and Quantum Cosmology · Physics 2020-04-23 Bob Osano

Concepts of everyday use like energy, heat, and temperature have acquired a precise meaning after the development of thermodynamics. Thermodynamics provides the basis for understanding how heat and work are related and with the general…

Statistical Mechanics · Physics 2007-05-23 D. Reguera , J. M. Rubi , J. M. G. Vilar

Lattice kinetic equations incorporating the effects of external/internal force fields via a shift of the local fields in the local equilibria, are placed within the framework of continuum kinetic theory. The mathematical treatment reveals…

Fluid Dynamics · Physics 2015-05-13 M. Sbragaglia , R. Benzi , L. Biferale , H. Chen , X. Shan , S. Succi

The exploration of far-from-equilibrium systems has been at the forefront of nonequilibrium thermodynamics, with a particular focus on understanding the fluctuations and response of thermodynamic systems to external perturbations. In this…

Statistical Mechanics · Physics 2025-02-13 Kangqiao Liu , Jie Gu

Machine learning models have emerged as a very effective strategy to sidestep time-consuming electronic-structure calculations, enabling accurate simulations of greater size, time scale and complexity. Given the interpolative nature of…

The average kinetic energy is widely used to characterize temperature in molecular dynamics (MD) simulation. In this letter, the applicability of three types of average kinetic energy as measures of temperature is investigated, i.e., the…

Computational Physics · Physics 2009-12-23 Bin Liu , Ran Xu , Xiaoqiao He

The energy-momentum tensor (EMT) is the conserved current corresponding to space-time translation symmetry. Its applications are remarkably diverse, ranging from the thermodynamics to the calculation of transport coefficients. While the EMT…

High Energy Physics - Lattice · Physics 2026-04-03 Pavan , Olaf Kaczmarek , Guy D. Moore , Christian Schmidt

Invariant integrability criterion for the equations of hydrodynamical type is found. This criterion is written in the form of vanishing for some tensor which is derived from the velocities matrix of hydrodynamical equations.

solv-int · Physics 2008-02-03 M. V. Pavlov , R. A. Sharipov , S. I. Svinolupov

Enzyme-catalysed reactions involve two distinct timescales. There is a short timescale on which enzymes bind to substrate molecules to produce bound complexes, and a comparatively long timescale on which the complex is transformed into a…

Quantitative Methods · Quantitative Biology 2023-10-06 Taylor Kearney , Mark B. Flegg

The theory of biochemical processes needs simple but realistic models of phenomena underlying microscopic dynamics of proteins. Many experiments performed in the 1980s have demonstrated that within the protein native state, apart from usual…

Condensed Matter · Physics 2007-05-23 Michal Kurzynski

We present an example counter to the widely-accepted concept on equilibrium states that "Any thermodynamic equilibrium state of two component systems is determined by specifying 4 thermodynamic variables that include at least 1 extensive…

Soft Condensed Matter · Physics 2018-05-16 Yuki Norizoe , Toshihiro Kawakatsu

Fidelity mechanics is formalized as a framework to investigate quantum critical phenomena in quantum many-body systems. This is achieved by introducing fidelity temperature to properly quantify quantum fluctuations, which, together with…

Strongly Correlated Electrons · Physics 2017-09-29 Huan-Qiang Zhou , Qian-Qian Shi , Yan-Wei Dai

The entanglement in a general mixed spin chain with arbitrary spin $S$ and 1/2 is investigated in the thermodynamical limit. The entanglement is witnessed by the magnetic susceptibility which decides a characteristic temperature for an…

Quantum Physics · Physics 2009-11-13 Xiang Hao , Shiqun Zhu

We discuss and review several thermodynamic criteria that have been introduced to characterize the thermal stability of a self-correcting quantum memory. We first examine the use of symmetry-breaking fields in analyzing the properties of…

Quantum Physics · Physics 2015-05-13 Stefano Chesi , Daniel Loss , Sergey Bravyi , Barbara M. Terhal

The reduced density matrices (RDMs) are calculated in the thermodynamic limit for the Chern-Simons non-relativistic particle system and Maxwell-Boltzmann (MB) statistics. It is established that they are zero outside of a diagonal and…

Statistical Mechanics · Physics 2016-08-31 W. Skrypnik

We review the trade-offs between speed, fluctuations, and thermodynamic cost involved with biological processes in nonequilibrium states, and discuss how optimal these processes are in light of the universal bound set by the thermodynamic…

Biological Physics · Physics 2022-02-28 Yonghyun Song , Changbong Hyeon
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