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Graph neural networks trained to predict observable dynamics can be used to decompose the temporal activity of complex heterogeneous systems into simple, interpretable representations. Here we apply this framework to simulated neural…

Neurons and Cognition · Quantitative Biology 2026-02-17 Cédric Allier , Larissa Heinrich , Magdalena Schneider , Stephan Saalfeld

The spreading dynamics in social networks are often studied under the assumption that individuals' statuses, whether informed or infected, are fully observable. However, in many real-world situations, such statuses remain unobservable,…

Social and Information Networks · Computer Science 2026-02-23 Derrick Gilchrist Edward Manoharan , Anubha Goel , Alexandros Iosifidis , Henri Hansen , Juho Kanniainen

The spread of traffic jams in urban networks has long been viewed as a complex spatio-temporal phenomenon that often requires computationally intensive microscopic models for analysis purposes. In this study, we present a framework to…

Recent studies have investigated various dynamic processes characterizing collective behaviors in real-world systems. However, these dynamics have been studied individually in specific contexts. In this article, we present a holistic…

Applied Physics · Physics 2025-01-28 Ming Xie , Shibo He , Aming Li , Zike Zhang , Youxian Sun , Jiming Chen

The study of temporal networks in discrete time has yielded numerous insights into time-dependent networked systems in a wide variety of applications. For many complex systems, however, it is useful to develop continuous-time models of…

Social and Information Networks · Computer Science 2021-02-10 Xinzhe Zuo , Mason A Porter

Modeling the spatiotemporal nature of the spread of infectious diseases can provide useful intuition in understanding the time-varying aspect of the disease spread and the underlying complex spatial dependency observed in people's mobility…

Machine Learning · Computer Science 2021-11-10 Padmaksha Roy , Shailik Sarkar , Subhodip Biswas , Fanglan Chen , Zhiqian Chen , Naren Ramakrishnan , Chang-Tien Lu

Complex contagion adoption dynamics are characterised by a node being more likely to adopt after multiple network neighbours have adopted. We show how to construct multi-type branching processes to approximate complex contagion adoption…

Physics and Society · Physics 2022-04-06 Leah A. Keating , James P. Gleeson , David J. P. O'Sullivan

Deep neural networks give us a powerful method to model the training dataset's relationship between input and output. We can regard that as a complex adaptive system consisting of many artificial neurons that work as an adaptive memory as a…

Disordered Systems and Neural Networks · Physics 2024-05-08 Kenichi Nakazato

Understanding and interacting with everyday physical scenes requires rich knowledge about the structure of the world, represented either implicitly in a value or policy function, or explicitly in a transition model. Here we introduce a new…

Contagion processes have been proven to fundamentally depend on the structural properties of the interaction networks conveying them. Many real networked systems are characterized by clustered substructures representing either collections…

Physics and Society · Physics 2021-06-01 Giulio Burgio , Alex Arenas , Sergio Gómez , Joan T. Matamalas

Spatiotemporal graph neural networks (STGNNs) have shown promising results in many domains, from forecasting to epidemiology. However, understanding the dynamics learned by these models and explaining their behaviour is significantly more…

Machine Learning · Computer Science 2026-04-08 Michele Guerra , Simone Scardapane , Filippo Maria Bianchi

Only a fast and global transformation towards decarbonization and sustainability can keep the Earth in a civilization-friendly state. As hotspots for (green) innovation and experimentation, cities could play an important role in this…

Physics and Society · Physics 2022-04-12 Niklas H. Kitzmann , Pawel Romanczuk , Jonathan F. Donges

To represent the causal relationships between variables, a directed acyclic graph (DAG) is widely utilized in many areas, such as social sciences, epidemics, and genetics. Many causal structure learning approaches are developed to learn the…

Machine Learning · Statistics 2025-01-14 Jianian Wang , Rui Song

Many of the biological, social and man-made networks around us are inherently dynamic, with their links switching on and off over time. The evolution of these networks is often non-Markovian, and the dynamics of their links correlated.…

Statistical Mechanics · Physics 2021-07-23 Oliver E. Williams , Piero Mazzarisi , Fabrizio Lillo , Vito Latora

Various coarse-grained models have been proposed to study the spreading dynamics in the network. A microscopic theory is needed to connect the spreading dynamics with the individual behaviors. In this letter, we unify the description of…

Statistical Mechanics · Physics 2021-04-14 Jin-Fu Chen , Yi-Mu Du , Hui Dong , Chang-Pu Sun

The characterization of dynamical processes in living systems provides important clues for their mechanistic interpretation and link to biological functions. Thanks to recent advances in microscopy techniques, it is now possible to…

Data Analysis, Statistics and Probability · Physics 2023-11-29 Jesús Pineda , Benjamin Midtvedt , Harshith Bachimanchi , Sergio Noé , Daniel Midtvedt , Giovanni Volpe , Carlo Manzo

Time series forecasting is an extensively studied subject in statistics, economics, and computer science. Exploration of the correlation and causation among the variables in a multivariate time series shows promise in enhancing the…

Machine Learning · Computer Science 2021-04-22 Chao Shang , Jie Chen , Jinbo Bi

Our ability to uncover complex network structure and dynamics from data is fundamental to understanding and controlling collective dynamics in complex systems. Despite recent progress in this area, reconstructing networks with stochastic…

Physics and Society · Physics 2014-07-18 Zhesi Shen , Wen-Xu Wang , Ying Fan , Zengru Di , Ying-Cheng Lai

Almost all real-world networks are subject to constant evolution, and plenty of evolving networks have been investigated to uncover the underlying mechanisms for a deeper understanding of the organization and development of them. Compared…

Social and Information Networks · Computer Science 2016-10-12 Tao Wu , Leiting Chen

This paper addresses the problem of online network topology inference for expanding graphs from a stream of spatiotemporal signals. Online algorithms for dynamic graph learning are crucial in delay-sensitive applications or when changes in…

Machine Learning · Computer Science 2024-09-16 Samuel Rey , Bishwadeep Das , Elvin Isufi
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