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Related papers: Manifold structure in graph embeddings

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We define a special case of tree decompositions for planar graphs that respect a given embedding of the graph. We study the analogous width of the resulting decomposition we call the embedded-width of a plane graph. We show both upper…

Discrete Mathematics · Computer Science 2017-03-23 Glencora Borradaile , Jeff Erickson , Hung Le , Robbie Weber

Graph embeddings learn the structure of networks and represent it in low-dimensional vector spaces. Community structure is one of the features that are recognized and reproduced by embeddings. We show that an iterative procedure, in which a…

Physics and Society · Physics 2024-07-30 Bianka Kovács , Sadamori Kojaku , Gergely Palla , Santo Fortunato

Network embedding has attracted an increasing attention over the past few years. As an effective approach to solve graph mining problems, network embedding aims to learn a low-dimensional feature vector representation for each node of a…

Social and Information Networks · Computer Science 2020-08-10 Xiao Shen , Fu-Lai Chung

In graph representation learning, it is important that the complex geometric structure of the input graph, e.g. hidden relations among nodes, is well captured in embedding space. However, standard Euclidean embedding spaces have a limited…

Machine Learning · Computer Science 2023-07-11 Tuc Nguyen-Van , Dung D. Le , The-Anh Ta

A temporal network -- a collection of snapshots recording the evolution of a network whose links appear and disappear dynamically -- can be interpreted as a trajectory in graph space. In order to characterize the complex dynamics of such…

Physics and Society · Physics 2025-05-16 Lucas Lacasa , F. Javier Marín-Rodríguez , Naoki Masuda , Lluís Arola-Fernández

Inspired by "quantum graphity" models for spacetime, a statistical model of graphs is proposed to explore possible realizations of emergent manifolds. Graphs with given numbers of vertices and edges are considered, governed by a very…

General Relativity and Quantum Cosmology · Physics 2013-04-09 Si Chen , Steven S. Plotkin

Symmetry breaking for graphs and other combinatorial objects is notoriously hard. On the one hand, complete symmetry breaks are exponential in size. On the other hand, current, state-of-the-art, partial symmetry breaks are often considered…

Logic in Computer Science · Computer Science 2026-04-01 Michael Codish , Mikoláš Janota

Spectral embedding is a procedure which can be used to obtain vector representations of the nodes of a graph. This paper proposes a generalisation of the latent position network model known as the random dot product graph, to allow…

Machine Learning · Statistics 2021-11-17 Patrick Rubin-Delanchy , Joshua Cape , Minh Tang , Carey E. Priebe

A very popular class of models for networks posits that each node is represented by a point in a continuous latent space, and that the probability of an edge between nodes is a decreasing function of the distance between them in this latent…

Statistics Theory · Mathematics 2025-01-07 Cosma Rohilla Shalizi , Dena Marie Asta

A graph is a data structure composed of dots (i.e. vertices) and lines (i.e. edges). The dots and lines of a graph can be organized into intricate arrangements. The ability for a graph to denote objects and their relationships to one…

Data Structures and Algorithms · Computer Science 2010-09-07 Marko A. Rodriguez , Peter Neubauer

Heterogeneous graphs (HGs) also known as heterogeneous information networks have become ubiquitous in real-world scenarios; therefore, HG embedding, which aims to learn representations in a lower-dimension space while preserving the…

Social and Information Networks · Computer Science 2020-12-02 Xiao Wang , Deyu Bo , Chuan Shi , Shaohua Fan , Yanfang Ye , Philip S. Yu

Graph is an important data representation ubiquitously existing in the real world. However, analyzing the graph data is computationally difficult due to its non-Euclidean nature. Graph embedding is a powerful tool to solve the graph…

Cryptography and Security · Computer Science 2021-10-07 Zhikun Zhang , Min Chen , Michael Backes , Yun Shen , Yang Zhang

Molecules have seemed like a natural fit to deep learning's tendency to handle a complex structure through representation learning, given enough data. However, this often continuous representation is not natural for understanding chemical…

Machine Learning · Computer Science 2021-03-12 Austin Clyde , Arvind Ramanathan , Rick Stevens

Visual rendering of graphs is a key task in the mapping of complex network data. Although most graph drawing algorithms emphasize aesthetic appeal, certain applications such as travel-time maps place more importance on visualization of…

Machine Learning · Statistics 2014-01-20 Brian Baingana , Georgios B. Giannakis

In this note we discuss a common misconception, namely that embeddings are always used to reduce the dimensionality of the item space. We show that when we measure dimensionality in terms of information entropy then the embedding of sparse…

Machine Learning · Computer Science 2019-01-09 Maxim Naumov

Graph representation learning (also called graph embeddings) is a popular technique for incorporating network structure into machine learning models. Unsupervised graph embedding methods aim to capture graph structure by learning a…

Social and Information Networks · Computer Science 2022-01-24 Andrew Stolman , Caleb Levy , C. Seshadhri , Aneesh Sharma

What is the dimension of a network? Here, we view it as the smallest dimension of Euclidean space into which nodes can be embedded so that pairwise distances accurately reflect the connectivity structure. We show that a recently proposed…

Social and Information Networks · Computer Science 2023-06-27 Peter Grindrod , Desmond John Higham , Henry-Louis de Kergorlay

Representing graphs as sets of node embeddings in certain curved Riemannian manifolds has recently gained momentum in machine learning due to their desirable geometric inductive biases, e.g., hierarchical structures benefit from hyperbolic…

Machine Learning · Computer Science 2020-06-09 Calin Cruceru , Gary Bécigneul , Octavian-Eugen Ganea

We introduce a novel embedding method diverging from conventional approaches by operating within function spaces of finite dimension rather than finite vector space, thus departing significantly from standard knowledge graph embedding…

Machine Learning · Statistics 2024-09-25 Louis Mozart Kamdem Teyou , Caglar Demir , Axel-Cyrille Ngonga Ngomo

Statistical learning in high-dimensional spaces is challenging without a strong underlying data structure. Recent advances with foundational models suggest that text and image data contain such hidden structures, which help mitigate the…

Machine Learning · Statistics 2025-02-04 Charles Arnal , Clement Berenfeld , Simon Rosenberg , Vivien Cabannes
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