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Structured data, such as graphs, is vital in machine learning due to its capacity to capture complex relationships and interactions. In recent years, the Fused Gromov-Wasserstein (FGW) distance has attracted growing interest because it…

Machine Learning · Computer Science 2025-09-29 Yikun Bai , Shuang Wang , Huy Tran , Hengrong Du , Juexin Wang , Soheil Kolouri

Supervised graph prediction addresses regression problems where the outputs are structured graphs. Although several approaches exist for graph-valued prediction, principled uncertainty quantification remains limited. We propose a conformal…

Machine Learning · Statistics 2026-03-30 Gabriel Melo , Thibaut de Saivre , Anna Calissano , Florence d'Alché-Buc

Unsupervised learning aims to capture the underlying structure of potentially large and high-dimensional datasets. Traditionally, this involves using dimensionality reduction (DR) methods to project data onto lower-dimensional spaces or…

Machine Learning · Computer Science 2025-06-30 Hugues Van Assel , Cédric Vincent-Cuaz , Nicolas Courty , Rémi Flamary , Pascal Frossard , Titouan Vayer

The Gromov-Wasserstein (GW) problem, a variant of the classical optimal transport (OT) problem, has attracted growing interest in the machine learning and data science communities due to its ability to quantify similarity between measures…

Machine Learning · Computer Science 2025-03-25 Yikun Bai , Abihith Kothapalli , Hengrong Du , Rocio Diaz Martin , Soheil Kolouri

The Weisfeiler-Leman algorithm ($1$-WL) is a well-studied heuristic for the graph isomorphism problem. Recently, the algorithm has played a prominent role in understanding the expressive power of message-passing graph neural networks…

Machine Learning · Computer Science 2024-05-29 Billy J. Franks , Christopher Morris , Ameya Velingker , Floris Geerts

The Weisfeiler-Lehman (WL) test is a widely used algorithm in graph machine learning, including graph kernels, graph metrics, and graph neural networks. However, it focuses only on the consistency of the graph, which means that it is unable…

Machine Learning · Computer Science 2023-05-02 Zhongxi Fang , Jianming Huang , Xun Su , Hiroyuki Kasai

Graph Neural Networks (GNNs) have emerged as the de facto standard for representation learning on graphs, owing to their ability to effectively integrate graph topology and node attributes. However, the inherent suboptimal nature of node…

Machine Learning · Computer Science 2023-12-27 Zhiyao Zhou , Sheng Zhou , Bochao Mao , Xuanyi Zhou , Jiawei Chen , Qiaoyu Tan , Daochen Zha , Yan Feng , Chun Chen , Can Wang

Graph Neural Networks (GNNs) are de facto solutions to structural data learning. However, it is susceptible to low-quality and unreliable structure, which has been a norm rather than an exception in real-world graphs. Existing graph…

Machine Learning · Computer Science 2023-03-20 Dongcheng Zou , Hao Peng , Xiang Huang , Renyu Yang , Jianxin Li , Jia Wu , Chunyang Liu , Philip S. Yu

Graph-level clustering is a fundamental task of data mining, aiming at dividing unlabeled graphs into distinct groups. However, existing deep methods that are limited by pooling have difficulty extracting diverse and complex graph structure…

Machine Learning · Computer Science 2025-04-03 Renda Han , Guangzhen Yao , Wenxin Zhang , Yu Li , Wen Xin , Huajie Lei , Mengfei Li , Zeyu Zhang , Chengze Du , Yahe Tian

Graph kernels are kernel methods measuring graph similarity and serve as a standard tool for graph classification. However, the use of kernel methods for node classification, which is a related problem to graph representation learning, is…

Machine Learning · Computer Science 2019-10-08 Yu Tian , Long Zhao , Xi Peng , Dimitris N. Metaxas

We propose min Generalized Sliced Gromov--Wasserstein (min-GSGW), a sliced formulation for the Gromov--Wasserstein (GW) problem using expressive generalized slicers. The key idea is to learn coupled nonlinear slicers that assign compatible…

Machine Learning · Computer Science 2026-05-14 Ashkan Shahbazi , Xinran Liu , Ping He , Soheil Kolouri

Subgraph representation learning has been effective in solving various real-world problems. However, current graph neural networks (GNNs) produce suboptimal results for subgraph-level tasks due to their inability to capture complex…

Machine Learning · Computer Science 2025-11-12 Dongkwan Kim , Alice Oh

An increasing number of machine learning tasks deal with learning representations from set-structured data. Solutions to these problems involve the composition of permutation-equivariant modules (e.g., self-attention, or individual…

Machine Learning · Computer Science 2021-03-09 Navid Naderializadeh , Soheil Kolouri , Joseph F. Comer , Reed W. Andrews , Heiko Hoffmann

Gromov-Wasserstein (GW) distance is a powerful tool for comparing and aligning probability distributions supported on different metric spaces. Recently, GW has become the main modeling technique for aligning heterogeneous data for a wide…

Machine Learning · Computer Science 2023-10-31 Lemin Kong , Jiajin Li , Jianheng Tang , Anthony Man-Cho So

Constructing the adjacency graph is fundamental to graph-based clustering. Graph learning in kernel space has shown impressive performance on a number of benchmark data sets. However, its performance is largely determined by the chosen…

Machine Learning · Computer Science 2019-03-15 Zhao Kang , Liangjian Wen , Wenyu Chen , Zenglin Xu

In this paper we present a novel graph kernel framework inspired the by the Weisfeiler-Lehman (WL) isomorphism tests. Any WL test comprises a relabelling phase of the nodes based on test-specific information extracted from the graph, for…

Machine Learning · Computer Science 2015-09-23 Giovanni Da San Martino , Nicolò Navarin , Alessandro Sperduti

Graph kernels are conventional methods for computing graph similarities. However, the existing R-convolution graph kernels cannot resolve both of the two challenges: 1) Comparing graphs at multiple different scales, and 2) Considering the…

Machine Learning · Computer Science 2024-05-14 Wei Ye , Hao Tian , Qijun Chen

Graph neural networks (GNNs) often struggle to learn discriminative node representations for heterophilic graphs, where connected nodes tend to have dissimilar labels and feature similarity provides weak structural cues. We propose…

Machine Learning · Computer Science 2025-12-30 Ayushman Raghuvanshi , Gonzalo Mateos , Sundeep Prabhakar Chepuri

To improve the robustness of graph neural networks (GNN), graph structure learning (GSL) has attracted great interest due to the pervasiveness of noise in graph data. Many approaches have been proposed for GSL to jointly learn a clean graph…

Machine Learning · Computer Science 2023-07-06 Shaogao Lv , Gang Wen , Shiyu Liu , Linsen Wei , Ming Li

Accurate traffic forecasting, the foundation of intelligent transportation systems (ITS), has never been more significant than nowadays due to the prosperity of smart cities and urban computing. Recently, Graph Neural Network truly…

Machine Learning · Computer Science 2022-05-18 Jiabin Tang , Tang Qian , Shijing Liu , Shengdong Du , Jie Hu , Tianrui Li