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Related papers: Boosting I/O and visualization for exascale era us…

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Developing an efficient code for large, multiscale astrophysical simulations is crucial in preparing the upcoming era of exascale computing. RAMSES is an astrophysical simulation code that employs parallel processing based on the Message…

Instrumentation and Methods for Astrophysics · Physics 2024-11-25 San Han , Yohan Dubois , Jaehyun Lee , Juhan Kim , Corentin Cadiou , Sukyoung K. Yi

The applications being developed within the U.S. Exascale Computing Project (ECP) to run on imminent Exascale computers will generate scientific results with unprecedented fidelity and record turn-around time. Many of these codes are based…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-08-04 Lipeng Wan , Axel Huebl , Junmin Gu , Franz Poeschel , Ana Gainaru , Ruonan Wang , Jieyang Chen , Xin Liang , Dmitry Ganyushin , Todd Munson , Ian Foster , Jean-Luc Vay , Norbert Podhorszki , Kesheng Wu , Scott Klasky

Efficient simulation of complex plasma dynamics is crucial for advancing fusion energy research. Particle-in-Cell (PIC) Monte Carlo (MC) simulations provide insights into plasma behavior, including turbulence and confinement, which are…

GROMACS is a widely used package for biomolecular simulation, and over the last two decades it has evolved from small-scale efficiency to advanced heterogeneous acceleration and multi-level parallelism targeting some of the largest…

Computational Engineering, Finance, and Science · Computer Science 2015-06-03 Páll Szilárd , Mark James Abraham , Carsten Kutzner , Berk Hess , Erik Lindahl

Turning the current experimental plasma accelerator state-of-the-art from a promising technology into mainstream scientific tools depends critically on high-performance, high-fidelity modeling of complex processes that develop over a wide…

Accelerator Physics · Physics 2018-12-26 J. -L. Vay , A. Almgren , J. Bell , L. Ge , D. P. Grote , M. Hogan , O. Kononenko , R. Lehe , A. Myers , C. Ng , J. Park , R. Ryne , O. Shapoval , M. Thevenet , W. Zhang

High-Performance Computing (HPC) platforms enable scientific software to achieve breakthroughs in many research fields such as physics, biology, and chemistry, by employing Research Software Engineering (RSE) techniques. These include 1)…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-10-16 Matan Rusanovsky , Re'em Harel , Lee-or Alon , Idan Mosseri , Harel Levin , Gal Oren

Modern simulations and observations in Astronomy & Cosmology (A&C) produce massively large data volumes, posing significant challenges for storage, access and data analysis. A long-standing bottleneck in high-performance computing,…

Instrumentation and Methods for Astrophysics · Physics 2025-10-29 Nicola Tuccari , Eva Sciacca , Yolanda Becerra , Enric Sosa Cintero , Emiliano Tramontana

Large-scale HPC simulations of plasma dynamics in fusion devices require efficient parallel I/O to avoid slowing down the simulation and to enable the post-processing of critical information. Such complex simulations lacking parallel I/O…

The exascale race is at an end with the announcement of the Aurora and Frontier machines. This next generation of supercomputers utilize diverse hardware architectures to achieve their compute performance, providing an added onus on the…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-11-26 Rahulkumar Gayatri , Stan Moore , Evan Weinberg , Nicholas Lubbers , Sarah Anderson , Jack Deslippe , Danny Perez , Aidan P. Thompson

High-performance computing (HPC) is undergoing significant changes. Next generation HPC systems are equipped with diverse global and local resources, such as I/O burst buffer resources, memory resources (e.g., on-chip and off-chip RAM,…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-08-31 Yuping Fan

The application of Transformer-based large models has achieved numerous success in recent years. However, the exponential growth in the parameters of large models introduces formidable memory challenge for edge deployment. Prior works to…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-09-11 Xueyuan Han , Zinuo Cai , Yichu Zhang , Chongxin Fan , Junhan Liu , Ruhui Ma , Rajkumar Buyya

Since its inception in 1995, LAMMPS has grown to be a world-class molecular dynamics code, with thousands of users, over one million lines of code, and multi-scale simulation capabilities. We discuss how LAMMPS has adapted to the modern…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-09-25 Anders Johansson , Evan Weinberg , Christian R. Trott , Megan J. McCarthy , Stan G. Moore

As exascale systems reach unprecedented concurrency, traditional performance analysis tools struggle with the overhead of massive-scale telemetry. We present an accelerated infrastructure for the hpcanalysis framework that leverages a…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-05-12 Dragana Grbic

Driven by artificial intelligence, data science, and high-resolution simulations, I/O workloads and hardware on high-performance computing (HPC) systems have become increasingly complex. This complexity can lead to large I/O overheads and…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-01-03 Hammad Ather , Jean Luca Bez , Chen Wang , Hank Childs , Allen D. Malony , Suren Byna

High-energy physics (HEP) experiments have developed millions of lines of code over decades that are optimized to run on traditional x86 CPU systems. However, we are seeing a rapidly increasing fraction of floating point computing power in…

The growth of machine learning (ML) workloads has underscored the importance of efficient memory hierarchies to address bandwidth, latency, and scalability challenges. HERMES focuses on optimizing memory subsystems for RISC-V architectures…

Hardware Architecture · Computer Science 2025-03-25 Pranav Suryadevara

The present work investigates the modeling of pre-exascale input/output (I/O) workloads of Adaptive Mesh Refinement (AMR) simulations through a simple proxy application. We collect data from the AMReX Castro framework running on the Summit…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-09-20 William F Godoy , Jenna Delozier , Gregory R Watson

Numerical simulations of multidimensional astrophysical fluids present considerable challenges. However, the development of exascale computing has significantly enhanced computational capabilities, motivating the development of new codes…

Solar and Stellar Astrophysics · Physics 2025-03-27 Lou Roussel-Hard , Edouard Audit , Luc Dessart , Thomas Padioleau , Yushan Wang

We propose Hercules, a parallel tree-based technique for exact similarity search on massive disk-based data series collections. We present novel index construction and query answering algorithms that leverage different summarization…

Databases · Computer Science 2022-12-29 Karima Echihabi , Panagiota Fatourou , Kostas Zoumpatianos , Themis Palpanas , Houda Benbrahim

Personalized recommendation is an important class of deep-learning applications that powers a large collection of internet services and consumes a considerable amount of datacenter resources. As the scale of production-grade recommendation…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-03-16 Liu Ke , Udit Gupta , Mark Hempstead , Carole-Jean Wu , Hsien-Hsin S. Lee , Xuan Zhang
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