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The automated analysis of microscopy images is a challenge in the context of single-cell tracking and quantification. This work has as goals the study of the performance of deep learning for segmenting microscopy images and the improvement…

Quantitative Methods · Quantitative Biology 2022-10-05 André O. Françani

The quality of the reconstructed photoacoustic image largely depends on the amount of photoacoustic (PA) boundary data available, which in turn is proportional to the number of detectors employed. In case of limited data (owing to less…

Image and Video Processing · Electrical Eng. & Systems 2020-01-20 Navchetan Awasthi , Rohit Pardasani , Sandeep Kumar Kalva , Manojit Pramanik , Phaneendra K. Yalavarthy

Light field imaging is limited in its computational processing demands of high sampling for both spatial and angular dimensions. Single-shot light field cameras sacrifice spatial resolution to sample angular viewpoints, typically by…

Computer Vision and Pattern Recognition · Computer Science 2018-02-07 Mayank Gupta , Arjun Jauhari , Kuldeep Kulkarni , Suren Jayasuriya , Alyosha Molnar , Pavan Turaga

Photoacoustic microscopy with large depth of focus is significant to the biomedical research. The conventional optical-resolution photoacoustic microscope (OR-PAM) suffers from limited depth of field (DoF) since the employed focused…

Image and Video Processing · Electrical Eng. & Systems 2020-09-07 Xianlin Song , Jianshuang Wei , Lingfang Song

Structured illumination microscopy (SIM) has become an important technique for optical super-resolution imaging because it allows a doubling of image resolution at speeds compatible for live-cell imaging. However, the reconstruction of SIM…

Image and Video Processing · Electrical Eng. & Systems 2020-03-26 Charles N. Christensen , Edward N. Ward , Pietro Lio , Clemens F. Kaminski

In this article, we address the challenges of image super-resolution and noise reduction, which are crucial for enhancing the quality of images derived from low-resolution or noisy data. We compared and assessed several approaches for…

Disordered Systems and Neural Networks · Physics 2024-06-17 Ngoc-Giau Pham , Thanh-Hai Tong Le , Van-Hieu Duong , Hong-Ngoc Tran , Phuoc-Hung Vo

Image reconstruction is an essential step of every medical imaging method, including Photoacoustic Tomography (PAT), which is a promising modality of imaging, that unites the benefits of both ultrasound and optical imaging methods.…

Image and Video Processing · Electrical Eng. & Systems 2024-04-26 Hesam Hakimnejad , Zohreh Azimifar , Narjes Goshtasbi

Deep-learning-based super-resolution photoacoustic angiography (PAA) is a powerful tool that restores blood vessel images from under-sampled images to facilitate disease diagnosis. Nonetheless, due to the scarcity of training samples, PAA…

Image and Video Processing · Electrical Eng. & Systems 2023-05-03 Yuanzheng Ma , Wangting Zhou , Rui Ma , Sihua Yang , Yansong Tang , Xun Guan

Photoacoustic tomography (PAT) is a newly developed medical imaging modality, which combines the advantages of pure optical imaging and ultrasound imaging, owning both high optical contrast and deep penetration depth. Very recently, PAT is…

Medical Physics · Physics 2021-09-21 Tengbo Lyu , Jiadong Zhang , Zijian Gao , Changchun Yang , Feng Gao , Fei Gao

Magnetic particle imaging reconstructs tracer distributions using a system matrix obtained through time-consuming, noise-prone calibration measurements. Methods for addressing imperfections in measured system matrices increasingly rely on…

Image and Video Processing · Electrical Eng. & Systems 2026-03-20 Artyom Tsanda , Sarah Reiss , Konrad Scheffler , Marija Boberg , Tobias Knopp

Undersampling the k-space data is widely adopted for acceleration of Magnetic Resonance Imaging (MRI). Current deep learning based approaches for supervised learning of MRI image reconstruction employ real-valued operations and…

Computer Vision and Pattern Recognition · Computer Science 2018-07-11 Muneer Ahmad Dedmari , Sailesh Conjeti , Santiago Estrada , Phillip Ehses , Tony Stöcker , Martin Reuter

Phase-contrast magnetic resonance imaging (MRI) provides time-resolved quantification of blood flow dynamics that can aid clinical diagnosis. Long in vivo scan times due to repeated three-dimensional (3D) volume sampling over cardiac phases…

Image and Video Processing · Electrical Eng. & Systems 2020-04-22 Valery Vishnevskiy , Jonas Walheim , Sebastian Kozerke

Ultrasonic imaging is being used to obtain information about the acoustic properties of a medium by emitting waves into it and recording their interaction using ultrasonic transducer arrays. The Delay-And-Sum (DAS) algorithm forms images…

Image and Video Processing · Electrical Eng. & Systems 2021-11-23 Georgios Pilikos , Lars Horchens , Tristan van Leeuwen , Felix Lucka

Image segmentation is a fundamental and challenging problem in computer vision with applications spanning multiple areas, such as medical imaging, remote sensing, and autonomous vehicles. Recently, convolutional neural networks (CNNs) have…

Computer Vision and Pattern Recognition · Computer Science 2020-06-24 Ali Hatamizadeh

Photoacoustic (PA) image reconstruction involves acoustic inversion that necessitates the specification of the speed of sound (SoS) within the medium of propagation. Due to the lack of information on the spatial distribution of the SoS…

Image and Video Processing · Electrical Eng. & Systems 2024-06-05 Mengjie Shi , Tom Vercauteren , Wenfeng Xia

Deep learning has been widely used for solving image reconstruction tasks but its deployability has been held back due to the shortage of high-quality training data. Unsupervised learning methods, such as the deep image prior (DIP),…

Computer Vision and Pattern Recognition · Computer Science 2023-06-06 Riccardo Barbano , Javier Antorán , Johannes Leuschner , José Miguel Hernández-Lobato , Bangti Jin , Željko Kereta

A crucial limitation of current high-resolution 3D photoacoustic tomography (PAT) devices that employ sequential scanning is their long acquisition time. In previous work, we demonstrated how to use compressed sensing techniques to improve…

Numerical Analysis · Mathematics 2020-09-07 Felix Lucka , Nam Huynh , Marta Betcke , Edward Zhang , Paul Beard , Ben Cox , Simon Arridge

While deep neural networks (NN) significantly advance image compressed sensing (CS) by improving reconstruction quality, the necessity of training current CS NNs from scratch constrains their effectiveness and hampers rapid deployment.…

Computer Vision and Pattern Recognition · Computer Science 2025-02-04 Bin Chen , Zhenyu Zhang , Weiqi Li , Chen Zhao , Jiwen Yu , Shijie Zhao , Jie Chen , Jian Zhang

Reconstruction of magnetic resonance imaging (MRI) data has been positively affected by deep learning. A key challenge remains: to improve generalisation to distribution shifts between the training and testing data. Most approaches aim to…

Image and Video Processing · Electrical Eng. & Systems 2024-02-15 Yuyang Xue , Chen Qin , Sotirios A. Tsaftaris

Convolutional neural networks (CNNs) have gained tremendous success in solving complex inverse problems. The aim of this work is to develop a novel CNN framework to reconstruct video sequence of dynamic live cells captured using a…

Computer Vision and Pattern Recognition · Computer Science 2020-10-29 Thanh Nguyen , Yujia Xue , Yunzhe Li , Lei Tian , George Nehmetallah
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