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Software, and software source code in particular, is widely used in modern research. It must be properly archived, referenced, described and cited in order to build a stable and long lasting corpus of scientic knowledge. In this article we…

Digital Libraries · Computer Science 2020-09-16 Roberto Di Cosmo

In open-source projects, anyone can contribute, so it is important to have an active continuous integration and continuous delivery (CI/CD) pipeline in addition to a protocol for reporting security concerns, especially in projects that are…

Software Engineering · Computer Science 2023-10-16 Jessy Ayala , Joshua Garcia

Open source software development, particularly within institutions such as universities and research laboratories, is often decentralized and difficult to track. Although academic teams produce many impactful scientific tools, their…

Software Engineering · Computer Science 2026-02-27 Juanita Gomez , Emily Lovell , Stephanie Lieggi , Alvaro A. Cardenas , James Davis

The definition of scholarly content has expanded to include the data and source code that contribute to a publication. While major archiving efforts to preserve conventional scholarly content, typically in PDFs (e.g., LOCKSS, CLOCKSS,…

Digital Libraries · Computer Science 2022-08-10 Emily Escamilla , Martin Klein , Talya Cooper , Vicky Rampin , Michele C. Weigle , Michael L. Nelson

Refactoring is the de-facto practice to optimize software health. While several studies propose refactoring strategies to optimize software design through applying design patterns and removing design defects, little is known about how…

Software Engineering · Computer Science 2021-11-16 Eman Abdullah AlOmar , Tianjia Wang , Vaibhavi Raut , Mohamed Wiem Mkaouer , Christian Newman , Ali Ouni

Millions of developers share their code on open-source platforms like GitHub, which offer social coding opportunities such as distributed collaboration and popularity-based ranking. Software engineering researchers have joined in as well,…

Software Engineering · Computer Science 2024-04-08 Kamel Alrashedy , Ahmed Binjahlan

Software Heritage is the largest existing public archive of software source code and accompanying development history. It spans more than five billion unique source code files and one billion unique commits , coming from more than 80…

Software Engineering · Computer Science 2020-11-17 Antoine Pietri , Diomidis Spinellis , Stefano Zacchiroli

Open-source repositories provide wealth of information and are increasingly being used to build artificial intelligence (AI) based systems to solve problems in software engineering. Open-source repositories could be of varying quality…

Software Engineering · Computer Science 2022-05-06 Niranjan Hasabnis

Modern software systems are increasingly dependent on third-party libraries. It is widely recognized that using mature and well-tested third-party libraries can improve developers' productivity, reduce time-to-market, and produce more…

Software Engineering · Computer Science 2016-12-07 Mohamed Aymen Saied , Ali Ouni , Houari Sahraoui , Raula Gaikovina Kula , Katsuro Inoue , David Lo

Clone-and-own approach is a natural way of source code reuse for software developers. To assess how known bugs and security vulnerabilities of a cloned component affect an application, developers and security analysts need to identify an…

Software Engineering · Computer Science 2017-04-28 Takashi Ishio , Yusuke Sakaguchi , Kaoru Ito , Katsuro Inoue

In this paper we introduce CrowdSource, a statistical natural language processing system designed to make rapid inferences about malware functionality based on printable character strings extracted from malware binaries. CrowdSource…

Cryptography and Security · Computer Science 2016-05-30 Joshua Saxe , Rafael Turner , Kristina Blokhin

Measuring and evaluating source code similarity is a fundamental software engineering activity that embraces a broad range of applications, including but not limited to code recommendation, duplicate code, plagiarism, malware, and smell…

Software Engineering · Computer Science 2023-06-29 Morteza Zakeri-Nasrabadi , Saeed Parsa , Mohammad Ramezani , Chanchal Roy , Masoud Ekhtiarzadeh

Peer code review locates common coding rule violations and simple logical errors in the early phases of software development, and thus reduces overall cost. However, in GitHub, identifying an appropriate code reviewer for a pull request is…

Software Engineering · Computer Science 2018-07-10 Mohammad Masudur Rahman , Chanchal K. Roy , Jason A. Collins

The immense amounts of source code provide ample challenges and opportunities during software development. To handle the size of code bases, developers commonly search for code, e.g., when trying to find where a particular feature is…

Software Engineering · Computer Science 2022-10-06 Luca Di Grazia , Michael Pradel

Software vulnerabilities, caused by unintentional flaws in source code, are a primary root cause of cyberattacks. Static analysis of source code has been widely used to detect these unintentional defects introduced by software developers.…

Software Engineering · Computer Science 2024-08-08 Andrew A Mahyari

Malicious attacks on open-source software packages are a growing concern. The discovery of the XZ Utils backdoor intensified these concerns because of the potential widespread impact. This study, therefore, explores the challenges of…

Cryptography and Security · Computer Science 2025-07-22 Duc-Ly Vu , Trevor Dunlap , Karla Obermeier-Velazquez , Thanh-Cong Nguyen , Paul Gibert , John Speed Meyers , Santiago Torres-Arias

We present and evaluate a large-scale malware detection system integrating machine learning with expert reviewers, treating reviewers as a limited labeling resource. We demonstrate that even in small numbers, reviewers can vastly improve…

Malware family classification is a significant issue with public safety and research implications that has been hindered by the high cost of expert labels. The vast majority of corpora use noisy labeling approaches that obstruct definitive…

Machine Learning · Computer Science 2021-12-01 Robert J. Joyce , Dev Amlani , Charles Nicholas , Edward Raff

[Background] In large open-source software projects, development knowledge is often fragmented across multiple artefacts and contributors such that individual stakeholders are generally unaware of the full breadth of the product features.…

Software Engineering · Computer Science 2024-08-05 Tim Puhlfürß , Lloyd Montgomery , Walid Maalej

Identifying security issues early is encouraged to reduce the latent negative impacts on software systems. Code review is a widely-used method that allows developers to manually inspect modified code, catching security issues during a…

Software Engineering · Computer Science 2024-05-10 Wachiraphan Charoenwet , Patanamon Thongtanunam , Van-Thuan Pham , Christoph Treude