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This article presents our steps to integrate complex and partly unstructured medical data into a clinical research database with subsequent decision support. Our main application is an integrated faceted search tool, accompanied by the…

Human-Computer Interaction · Computer Science 2018-10-31 Daniel Sonntag , Hans-Jürgen Profitlich

Lay summarisation aims to jointly summarise and simplify a given text, thus making its content more comprehensible to non-experts. Automatic approaches for lay summarisation can provide significant value in broadening access to scientific…

Computation and Language · Computer Science 2023-12-13 Tomas Goldsack , Zhihao Zhang , Chenghua Lin , Carolina Scarton

Cybersecurity is a very challenging topic of research nowadays, as digitalization increases the interaction of people, software and services on the Internet by means of technology devices and networks connected to it. The field is broad and…

Artificial Intelligence · Computer Science 2021-07-02 Nuno Oliveira , Norberto Sousa , Isabel Praça

Data sharing is fundamental to scientific progress, enhancing transparency, reproducibility, and innovation across disciplines. Despite its growing significance, the variability of data-sharing practices across research fields remains…

Digital Libraries · Computer Science 2025-02-04 Puyu Yang , Giovanni Colavizza

Public data archives are the backbone of modern biological and biomedical research. While archives for biological molecules and structures are well-established, resources for imaging data do not yet cover the full range of spatial and…

Quantitative Methods · Quantitative Biology 2018-11-05 Jan Ellenberg , Jason R Swedlow , Mary Barlow , Charles E Cook , Ardan Patwardhan , Alvis Brazma , Ewan Birney

Biomedical research increasingly relies on heterogeneous, high-dimensional datasets, yet effective visualization remains hindered by fragmented code resources, steep programming barriers, and limited domain-specific guidance. Bizard is an…

Introduction: Big data in healthcare must be exploited to achieve a substantial increase in efficiency and competitiveness. Especially the analysis of patient-related data possesses huge potential to improve decision-making processes.…

The data paper, an emerging scholarly genre, describes research datasets and is intended to bridge the gap between the publication of research data and scientific articles. Research examining how data papers report data events, such as data…

Digital Libraries · Computer Science 2019-03-18 Kai Li , Jane Greenberg , Jillian Dunic

Recent advances in the healthcare industry have led to an abundance of unstructured data, making it challenging to perform tasks such as efficient and accurate information retrieval at scale. Our work offers an all-in-one scalable solution…

Information Retrieval · Computer Science 2023-02-15 Shreya Saxena , Raj Sangani , Siva Prasad , Shubham Kumar , Mihir Athale , Rohan Awhad , Vishal Vaddina

With the rapid development of computer software and hardware technologies, more and more healthcare data are becoming readily available from clinical institutions, patients, insurance companies and pharmaceutical industries, among others.…

Machine Learning · Computer Science 2020-08-24 Jie Xu , Benjamin S. Glicksberg , Chang Su , Peter Walker , Jiang Bian , Fei Wang

Biomedical research centers can empower basic discovery and novel therapeutic strategies by leveraging their large-scale datasets from experiments and patients. This data, together with new technologies to create and analyze it, has ushered…

Scientific knowledge is growing rapidly, making it difficult to track progress and high-level conceptual links across broad disciplines. While tools like citation networks and search engines help retrieve related papers, they lack the…

Computation and Language · Computer Science 2025-10-29 Muhan Gao , Jash Shah , Weiqi Wang , Kuan-Hao Huang , Daniel Khashabi

This work bridges the technical concepts underlying distributed computing and blockchain technologies with their profound socioeconomic and sociopolitical implications, particularly on academic research and the healthcare industry. Several…

Computers and Society · Computer Science 2017-09-22 Omar Metwally

Since time immemorial, people have been looking for ways to organize scientific knowledge into some systems to facilitate search and discovery of new ideas. The problem was partially solved in the pre-Internet era using library…

Information Retrieval · Computer Science 2018-11-21 Mariia Seleznova , Anton Belyy , Aleksei Sholokhov

A vast amount of medical knowledge is available for public use through online health forums, and question-answering platforms on social media. The majority of the population in the United States doesn't have the right amount of health…

Computation and Language · Computer Science 2025-01-28 Haritha Gangavarapu , Giridhar Kaushik Ramachandran , Kevin Lybarger , Meliha Yetisgen , Özlem Uzuner

At this moment, databanks worldwide contain brain images of previously unimaginable numbers. Combined with developments in data science, these massive data provide the potential to better understand the genetic underpinnings of brain…

Machine Learning · Statistics 2025-01-30 Santiago Silva , Boris Gutman , Eduardo Romero , Paul M Thompson , Andre Altmann , Marco Lorenzi

Current research in biology heavily depends on the availability and efficient use of information. In order to build new knowledge, various sources of biological data must often be combined. Semantic Web technologies, which provide a common…

Quantitative Methods · Quantitative Biology 2009-02-19 Claude Pasquier

Users increasingly expect modern search systems to offer a unified interface that seamlessly retrieves information from diverse data sources and formats. However, current information retrieval (IR) evaluation benchmarks have not kept pace…

Information Retrieval · Computer Science 2026-05-13 Mehmet Deniz Türkmen , Suchana Datta , Dwaipayan Roy , Daniel Hienert , Philipp Mayr , Derek Greene

The Web community has introduced a set of standards and technologies for representing, querying, and manipulating a globally distributed data structure known as the Web of Data. The proponents of the Web of Data envision much of the world's…

Artificial Intelligence · Computer Science 2009-08-05 Marko A. Rodriguez

Research is a tertiary priority in the EHR, where the priorities are patient care and billing. Because of this, the data is not standardized or formatted in a manner easily adapted to machine learning approaches. Data may be missing for a…

Machine Learning · Computer Science 2017-07-25 Brett K. Beaulieu-Jones