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We propose and study a hydrodynamic model for pattern formation in mixtures of molecular motors and microtubules. The steady state patterns we obtain in different regimes of parameter space include arrangements of vortices and asters…

Statistical Mechanics · Physics 2009-11-10 Sumithra Sankararaman , Gautam I. Menon , P. B. Sunil Kumar

Inspired by recent experimental observation of patterning at the membrane of a living cell, we propose a generic model for the dynamics of a fluctuating interface driven by particle-like inclusions which stimulate its growth. We find that…

Soft Condensed Matter · Physics 2019-07-25 F. Cagnetta , M. R. Evans , D. Marenduzzo

Models of active nematics in biological systems normally require complexity arising from the hydrodynamics involved at the microscopic level as well as the viscoelastic nature of the system. Here we show that a minimal, space-independent,…

Soft Condensed Matter · Physics 2022-06-27 Emmanuel L. C. VI M. Plan , Huong Le Thi , Julia M. Yeomans , Amin Doostmohammadi

Spontaneous synchronization has long served as a paradigm for behavioral uniformity that can emerge from interactions in complex systems. When the interacting entities are identical and their coupling patterns are also identical, the…

Disordered Systems and Neural Networks · Physics 2016-12-30 Takashi Nishikawa , Adilson E. Motter

Intracellular protein patterns regulate a variety of vital cellular processes such as cell division and motility, which often involve dynamic changes of cell shape. These changes in cell shape may in turn affect the dynamics of…

Pattern Formation and Solitons · Physics 2023-07-19 Laeschkir Würthner , Andriy Goychuk , Erwin Frey

We report the generation of a dynamic labyrinthine pattern in an active alcohol film. A dynamic labyrinthine pattern is formed along the contact line of air/pentanol/aqueous three phases. The contact line shows a clear time-dependent change…

Fluid Dynamics · Physics 2015-06-11 Yong-Jun Chen , Yuko Nagamine , Kenichi Yoshikawa

Active nematic fluids confined in narrow channels generate spontaneous flows when the activity is sufficiently intense. Recently, it was shown that if the molecular anchoring at the channel walls is conflicting flows are initiated even in…

Soft Condensed Matter · Physics 2021-11-02 C. Rorai , F. Toschi , I. Pagonabarraga

We study collective self-organization of weakly magnetic active suspensions in a uniform external field by analyzing a mesoscopic continuum model that we have recently developed. Our model is based on a Smoluchowski equation for a particle…

Soft Condensed Matter · Physics 2020-10-28 Fabian R. Koessel , Sara Jabbari-Farouji

We study an agent-based model of self-propelled particles with a velocity-dependent alignment rule. This interaction is orientation weighted and acts along the line connecting neighboring particles. Tuning the alignment strength produces…

Soft Condensed Matter · Physics 2026-05-19 Bohdan Dobosh , Alexander Yakimenko

Molecular building blocks interacting at the nanoscale organize spontaneously into stable mono- layers that display intriguing long-range ordering motifs on the surface of atomic substrates. The patterning process, if appropriately…

Mesoscale and Nanoscale Physics · Physics 2011-02-18 Marta Balbás Gambra , Carsten Rohr , Kathrin Gruber , Bianca Hermann , Thomas Franosch

A model for polar filaments interacting via molecular motor complexes is investigated which exhibits bifurcations to spatial patterns. It is shown that the homogeneous distribution of filaments, such as actin or microtubules, may become…

Soft Condensed Matter · Physics 2007-05-23 Falko Ziebert , Walter Zimmermann

Controlling laser-induced pattern formation remains a long-standing challenge. A key advance was recognising the pivotal role of intrinsic feedback mechanisms in self-organisation, which enabled self-similar patterns with long-range order…

Closed shell molecular structures are under normal conditions time-reversal invariant. Experimental evidences point, however, towards that this invariance may be locally violated when the structure is in contact with a particle reservoir.…

Mesoscale and Nanoscale Physics · Physics 2023-12-27 M. Shiranzaei , S. Kalhöfer , J. Fransson

Actomyosin networks are major structural components of the cell. They provide mechanical integrity and allow dynamic remodeling of eukaryotic cells, self-organizing into the diverse patterns essential for development. We provide a…

Biological Physics · Physics 2012-04-17 Shenshen Wang , Peter G. Wolynes

Active nematics are out-of-equilibrium systems in which energy injection at the microscale drives emergent collective behaviors, from spontaneous flows to active turbulence. While the dynamics of these systems have been extensively studied,…

Soft Condensed Matter · Physics 2025-04-15 Ahmet Umut Akduman , Yusuf Sariyar , Giuseppe Negro , Livio Nicola Carenza

Active materials are those in which individual, uncoordinated local stresses drive the material out of equilibrium on a global scale. Examples of such assemblies can be seen across scales from schools of fish to the cellular cytoskeleton…

Soft Condensed Matter · Physics 2022-09-30 Nitin Kumar , Rui Zhang , Steven A. Redford , Juan J. de Pablo , Margaret L. Gardel

We present a new microscopic model of granular medium to study the role of dynamical correlations and the onset of spatial order induced by the inelasticity of the interactions. In spite of its simplicity, it features several different…

Statistical Mechanics · Physics 2009-11-07 A. Baldassarri , U. Marini Bettolo Marconi , A. Puglisi

We develop a theory of the domain patterns in systems with competing short-range attractive interactions and long range repulsive Coulomb interactions. We take an energetic approach, in which patterns are considered as critical points of a…

Soft Condensed Matter · Physics 2009-11-07 C. B. Muratov

A wide range of experimental systems including gliding, swarming and swimming bacteria, in-vitro motility assays as well as shaken granular media are commonly described as self-propelled rods. Large ensembles of those entities display a…

Statistical Mechanics · Physics 2021-01-18 Markus Bär , Robert Großmann , Sebastian Heidenreich , Fernando Peruani

Active living matter continuously creates and annihilates topological defects in a process that remains poorly understood. Here, we investigate these dynamics in two distinct active living systems: swarming bacteria and human bronchial…

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